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  5. Spa_g30681

Spa_g30681


Description : EC_3.2 glycosylase & original description: none


Gene families : OG0000452 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000452_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g30681
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00250720 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00019p00250890 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.03 OrthoFinder output from all 47 species
AT1G10640 No alias Pectin lyase-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G60590 No alias Pectin lyase-like superfamily protein 0.08 OrthoFinder output from all 47 species
AT1G70500 No alias Pectin lyase-like superfamily protein 0.05 OrthoFinder output from all 47 species
AT1G80170 No alias Pectin lyase-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G26610 No alias Pectin lyase-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G57510 ADPG1 Pectin lyase-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G01890 No alias Pectin lyase-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g112354 No alias EC_3.2 glycosylase & original description: none 0.07 OrthoFinder output from all 47 species
Aev_g36775 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g01855 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04943 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14084 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12304 No alias EC_3.2 glycosylase & original description: none 0.12 OrthoFinder output from all 47 species
Aop_g37061 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene13416.t1 Aspi01Gene13416 EC_3.2 glycosylase & original description: none 0.08 OrthoFinder output from all 47 species
Aspi01Gene44829.t1 Aspi01Gene44829 EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene46866.t1 Aspi01Gene46866 EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0157.g053776 No alias EC_3.2 glycosylase & original description: CDS=175-1677 0.05 OrthoFinder output from all 47 species
Azfi_s0246.g060021 No alias EC_3.2 glycosylase & original description: CDS=1-1317 0.05 OrthoFinder output from all 47 species
Cba_g14013 No alias EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g11602 No alias EC_3.2 glycosylase & original description: none 0.1 OrthoFinder output from all 47 species
Ehy_g09828 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g15391 No alias EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g22868 No alias polygalacturonase *(PGX1-like) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g25659 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01013800001 No alias Cell wall.pectin.modification and... 0.02 OrthoFinder output from all 47 species
GSVIVT01017305001 No alias Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01017644001 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01028132001 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01028189001 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01032117001 QRT2 Cell wall.pectin.modification and... 0.03 OrthoFinder output from all 47 species
GSVIVT01032447001 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
GSVIVT01033362001 ADPG2, PGAZAT Cell wall.pectin.modification and... 0.04 OrthoFinder output from all 47 species
GSVIVT01033364001 ADPG2, PGAZAT Cell wall.pectin.modification and... 0.04 OrthoFinder output from all 47 species
Gb_07779 No alias Polygalacturonase OS=Actinidia deliciosa... 0.03 OrthoFinder output from all 47 species
LOC_Os01g44970.1 LOC_Os01g44970 polygalacturonase (PGX1) 0.02 OrthoFinder output from all 47 species
LOC_Os05g20020.1 LOC_Os05g20020 Polygalacturonase At1g48100 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os05g50260.1 LOC_Os05g50260 Polygalacturonase At1g48100 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
LOC_Os11g14400.1 LOC_Os11g14400 Polygalacturonase OS=Prunus persica... 0.04 OrthoFinder output from all 47 species
Len_g00597 No alias EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
Len_g55532 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g17901 No alias EC_3.2 glycosylase & original description: none 0.09 OrthoFinder output from all 47 species
Lfl_g19271 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
MA_10862g0010 No alias Probable polygalacturonase At1g80170 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_13282g0010 No alias Polygalacturonase OS=Actinidia deliciosa... 0.03 OrthoFinder output from all 47 species
Mp3g10720.1 No alias Polygalacturonase OS=Chamaecyparis obtusa... 0.03 OrthoFinder output from all 47 species
Mp3g21140.1 No alias Polygalacturonase At1g48100 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g31860 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g11845 No alias EC_3.2 glycosylase & original description: none 0.09 OrthoFinder output from all 47 species
Ore_g42249 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g17999 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03112 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g64037 No alias EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0002.g001042 No alias EC_3.2 glycosylase & original description: CDS=170-1315 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002755 No alias not classified & original description: CDS=1-783 0.04 OrthoFinder output from all 47 species
Sam_g15323 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Smo78038 No alias Cell wall.pectin.modification and... 0.05 OrthoFinder output from all 47 species
Solyc03g116580.4.1 Solyc03g116580 Probable polygalacturonase At1g80170 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc04g008230.3.1 Solyc04g008230 Polygalacturonase At1g48100 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Solyc04g015530.3.1 ADPG2, PGAZAT,... polygalacturonase (QRT2) 0.03 OrthoFinder output from all 47 species
Solyc05g005170.4.1 Solyc05g005170 Polygalacturonase At1g48100 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc08g014560.3.1 Solyc08g014560 Polygalacturonase OS=Prunus persica... 0.02 OrthoFinder output from all 47 species
Solyc10g047570.2.1 Solyc10g047570 Exopolygalacturonase (Fragment) OS=Platanus acerifolia... 0.02 OrthoFinder output from all 47 species
Solyc12g009420.3.1 QRT2, Solyc12g009420 Polygalacturonase QRT2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Tin_g19992 No alias EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e006091_P001 ADPG2, PGAZAT,... polygalacturonase (QRT2) 0.01 OrthoFinder output from all 47 species
Zm00001e006092_P001 ADPG2, PGAZAT,... polygalacturonase (QRT2) 0.03 OrthoFinder output from all 47 species
Zm00001e011814_P002 ADPG2, PGAZAT,... Polygalacturonase OS=Actinidia deliciosa... 0.03 OrthoFinder output from all 47 species
Zm00001e013553_P001 Zm00001e013553 Probable polygalacturonase At1g80170 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e027720_P001 Zm00001e027720 Polygalacturonase At1g48100 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e032294_P001 Zm00001e032294 Probable polygalacturonase At1g80170 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e036989_P001 Zm00001e036989 Polygalacturonase At1g48100 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005199 structural constituent of cell wall IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 124 423
No external refs found!