Spa_g30219

Description : E3 ubiquitin ligase & original description: none

Gene families : OG0001516 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001516_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Spa_g30219
Cluster	HCCA: Cluster_1

Target	Alias	Description	ECC score	Gene Family Method
LOC_Os11g39130.1	LOC_Os11g39130	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Lfl_g31064	No alias	E3 ubiquitin ligase & original description: none	0.03	OrthoFinder output from all 47 species
Solyc04g011570.3.1	Solyc04g011570	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Zm00001e021209_P002	Zm00001e021209	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR011016	Znf_RING-CH	103	139

External Links

No external refs found!