Spa_g30096

Description : regulatory protein *(SCAMP) of exocytic trafficking & original description: none

Gene families : OG0001155 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001155_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Spa_g30096

Target	Alias	Description	ECC score	Gene Family Method
Ala_g08939	No alias	regulatory protein *(SCAMP) of exocytic trafficking &...	0.03	OrthoFinder output from all 47 species
Aop_g01667	No alias	regulatory protein *(SCAMP) of exocytic trafficking &...	0.05	OrthoFinder output from all 47 species
Ceric.06G044300.1	Ceric.06G044300	regulatory protein *(SCAMP) of exocytic trafficking &...	0.04	OrthoFinder output from all 47 species
Cre02.g089900	No alias	Secretory carrier-associated membrane protein 5 OS=Oryza...	0.01	OrthoFinder output from all 47 species
Dac_g10505	No alias	regulatory protein *(SCAMP) of exocytic trafficking &...	0.04	OrthoFinder output from all 47 species
LOC_Os03g38590.1	LOC_Os03g38590	Secretory carrier-associated membrane protein 4 OS=Oryza...	0.03	OrthoFinder output from all 47 species
Pir_g12817	No alias	regulatory protein *(SCAMP) of exocytic trafficking &...	0.02	OrthoFinder output from all 47 species
Solyc10g009180.3.1	SC3, Solyc10g009180	Secretory carrier-associated membrane protein 3...	0.02	OrthoFinder output from all 47 species
Zm00001e004899_P001	SC3, Zm00001e004899	Secretory carrier-associated membrane protein 4 OS=Oryza...	0.04	OrthoFinder output from all 47 species
Zm00001e012486_P001	SC3, Zm00001e012486	Secretory carrier-associated membrane protein 4 OS=Oryza...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	IEA	Interproscan
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006811	monoatomic ion transport	IEP	HCCA
BP	GO:0006812	monoatomic cation transport	IEP	HCCA
BP	GO:0006813	potassium ion transport	IEP	HCCA
MF	GO:0008324	monoatomic cation transmembrane transporter activity	IEP	HCCA
MF	GO:0015075	monoatomic ion transmembrane transporter activity	IEP	HCCA
MF	GO:0015079	potassium ion transmembrane transporter activity	IEP	HCCA
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	HCCA
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	HCCA
BP	GO:0030001	metal ion transport	IEP	HCCA
BP	GO:0034220	monoatomic ion transmembrane transport	IEP	HCCA
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	HCCA
BP	GO:0071805	potassium ion transmembrane transport	IEP	HCCA
BP	GO:0098655	monoatomic cation transmembrane transport	IEP	HCCA
BP	GO:0098660	inorganic ion transmembrane transport	IEP	HCCA
BP	GO:0098662	inorganic cation transmembrane transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR007273	SCAMP	110	280

External Links

No external refs found!