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  5. Spa_g29731

Spa_g29731


Description : not classified & original description: none


Gene families : OG0000198 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000198_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g29731

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00090370 evm_27.TU.AmTr_v1... PLASMODESMATA CALLOSE-BINDING PROTEIN 2 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00013p00250830 evm_27.TU.AmTr_v1... PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00086p00121550 evm_27.TU.AmTr_v1... Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT1G26450 No alias Carbohydrate-binding X8 domain superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g25324 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g38371 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g18859 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g27838 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g28990 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g08617 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g31221 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g43149 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g00233 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g38386 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene04282.t1 Aspi01Gene04282 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene48986.t1 Aspi01Gene48986 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g00460 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g05481 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g09344 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.09G086200.1 Ceric.09G086200 not classified & original description: pacid=50588590... 0.04 OrthoFinder output from all 47 species
Ceric.16G030300.1 Ceric.16G030300 not classified & original description: pacid=50589646... 0.03 OrthoFinder output from all 47 species
Ceric.27G013100.1 Ceric.27G013100 not classified & original description: pacid=50605460... 0.06 OrthoFinder output from all 47 species
Ceric.37G009700.1 Ceric.37G009700 not classified & original description: pacid=50616747... 0.05 OrthoFinder output from all 47 species
Dac_g00519 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g03506 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g07234 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g08788 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g21791 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g37849 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g04537 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g04307 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08964 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g10392 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01030060001 No alias Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os02g29980.1 LOC_Os02g29980 Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os03g54910.1 PDCB2, E13L3,... PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os07g40940.1 PDCB2, E13L3,... PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Len_g01578 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g14015 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g35363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g56789 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_158566g0010 No alias Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_939354g0010 No alias Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Msp_g17781 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g18020 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g29067 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g36714 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g04114 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10702 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g12104 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g23292 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g39197 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g41952 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g10419 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g46923 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g16036 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g24768 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g33619 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g36355 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g31368 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g46748 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo29014 No alias Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Solyc01g010310.4.1 Solyc01g010310 PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc03g115200.3.1 PDCB1, Solyc03g115200 PLASMODESMATA CALLOSE-BINDING PROTEIN 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc05g016390.4.1 Solyc05g016390 Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g28067 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g46844 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g50712 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g54892 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g01442 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g14190 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e022608_P001 Zm00001e022608 Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0019104 DNA N-glycosylase activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
InterPro domains Description Start Stop
IPR012946 X8 256 327
No external refs found!