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  5. Spa_g29708

Spa_g29708 (TOM40)


Aliases : TOM40

Description : channel-forming component *(Tom40) of outer mitochondrion membrane TOM translocation system & original description: none


Gene families : OG0002328 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002328_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g29708

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00119p00124540 TOM40,... Protein translocation.mitochondrion.outer mitochondrion... 0.04 OrthoFinder output from all 47 species
Adi_g082046 TOM40 channel-forming component *(Tom40) of outer... 0.02 OrthoFinder output from all 47 species
Adi_g110607 TOM40 channel-forming component *(Tom40) of outer... 0.02 OrthoFinder output from all 47 species
Ala_g01261 TOM40 channel-forming component *(Tom40) of outer... 0.03 OrthoFinder output from all 47 species
Aop_g01186 TOM40 channel-forming component *(Tom40) of outer... 0.03 OrthoFinder output from all 47 species
Ceric.22G037300.1 TOM40, Ceric.22G037300 channel-forming component *(Tom40) of outer... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00022075.49 TOM40 Protein translocation.mitochondrion.outer mitochondrion... 0.02 OrthoFinder output from all 47 species
Dac_g36688 TOM40 channel-forming component *(Tom40) of outer... 0.06 OrthoFinder output from all 47 species
Ehy_g09714 TOM40 channel-forming component *(Tom40) of outer... 0.02 OrthoFinder output from all 47 species
LOC_Os01g16910.1 TOM40, LOC_Os01g16910 component Tom40 of outer mitochondrion membrane TOM... 0.04 OrthoFinder output from all 47 species
Len_g05225 TOM40 channel-forming component *(Tom40) of outer... 0.03 OrthoFinder output from all 47 species
Mp3g10590.1 TOM40 component Tom40 of outer mitochondrion membrane TOM... 0.02 OrthoFinder output from all 47 species
Pir_g10186 TOM40 channel-forming component *(Tom40) of outer... 0.04 OrthoFinder output from all 47 species
Sam_g07859 No alias channel-forming component *(Tom40) of outer... 0.02 OrthoFinder output from all 47 species
Sam_g48816 No alias channel-forming component *(Tom40) of outer... 0.03 OrthoFinder output from all 47 species
Solyc06g007710.4.1 TOM40, Solyc06g007710 component Tom40 of outer mitochondrion membrane TOM... 0.05 OrthoFinder output from all 47 species
Solyc06g082793.1.1 TOM40, Solyc06g082793 component Tom40 of outer mitochondrion membrane TOM... 0.04 OrthoFinder output from all 47 species
Zm00001e025489_P003 TOM40, Zm00001e025489 component Tom40 of outer mitochondrion membrane TOM... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005741 mitochondrial outer membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016229 steroid dehydrogenase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
MF GO:0042803 protein homodimerization activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
MF GO:0060590 ATPase regulator activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR027246 Porin_Euk/Tom40 82 354
No external refs found!