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  5. Spa_g29582

Spa_g29582 (STH)


Aliases : STH

Description : BBX class-IV transcription factor & original description: none


Gene families : OG0000403 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000403_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g29582
Cluster HCCA: Cluster_209

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00099p00149290 LZF1, STH3,... RNA biosynthesis.transcriptional activation.C2C2... 0.04 OrthoFinder output from all 47 species
AT1G75540 STH2 salt tolerance homolog2 0.02 OrthoFinder output from all 47 species
AT4G39070 No alias B-box zinc finger family protein 0.03 OrthoFinder output from all 47 species
Adi_g115013 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g04775 No alias BBX class-IV transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g12623 No alias BBX class-IV transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g13138 STO BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g14676 STO BBX class-IV transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g06573 LZF1, STH3, DBB3 BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g37029 No alias BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04332 No alias BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18719 STO BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26676 LZF1, STH3, DBB3 BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Gb_39727 STH transcription factor (BBX-DBB) 0.03 OrthoFinder output from all 47 species
LOC_Os02g39360.1 STH, LOC_Os02g39360 transcription factor (BBX-DBB) 0.02 OrthoFinder output from all 47 species
Len_g31145 STH BBX class-IV transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g20142 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g37373 STO BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g11699 No alias BBX class-IV transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g32457 LZF1, STH3, DBB3 BBX class-IV transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010219 STO BBX class-IV transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0084.g018285 STO BBX class-IV transcription factor & original... 0.02 OrthoFinder output from all 47 species
Spa_g56808 STO BBX class-IV transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e034791_P001 Zm00001e034791 transcription factor (BBX-DBB) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0043565 sequence-specific DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR000315 Znf_B-box 56 97
IPR000315 Znf_B-box 4 47
No external refs found!