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  5. Spa_g29357

Spa_g29357


Description : RNA editing co-factor *(WTG1) & original description: none


Gene families : OG0007779 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007779_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g29357
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
Mp1g17440.1 No alias RNA editing factor (WTG1) 0.02 OrthoFinder output from all 47 species
Mp6g20350.1 No alias RNA editing factor (WTG1) 0.02 OrthoFinder output from all 47 species
Nbi_g05340 No alias RNA editing co-factor *(WTG1) & original description: none 0.08 OrthoFinder output from all 47 species
Ppi_g09712 No alias RNA editing co-factor *(WTG1) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0043.g012801 No alias RNA editing co-factor *(WTG1) & original description: CDS=1-720 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0042802 identical protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004668 protein-arginine deiminase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006595 polyamine metabolic process IEP HCCA
BP GO:0006596 polyamine biosynthetic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009309 amine biosynthetic process IEP HCCA
BP GO:0009445 putrescine metabolic process IEP HCCA
BP GO:0009446 putrescine biosynthetic process IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016813 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042401 biogenic amine biosynthetic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR011717 TPR-4 440 460
IPR041617 TPR_MalT 228 384
No external refs found!