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  4. Sequence
  5. Spa_g29266

Spa_g29266


Description : not classified & original description: none


Gene families : OG0003362 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003362_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g29266
Cluster HCCA: Cluster_149

Target Alias Description ECC score Gene Family Method Actions
Aev_g07132 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g09013 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g42612 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g28177 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g32846 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g51412 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g20661 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene32860.t1 Aspi01Gene32860 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene32868.t1 Aspi01Gene32868 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene32872.t1 Aspi01Gene32872 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene32873.t1 Aspi01Gene32873 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene32878.t1 Aspi01Gene32878 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g61119 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ceric.01G026500.1 Ceric.01G026500 not classified & original description: pacid=50592018... 0.05 OrthoFinder output from all 47 species
Ceric.09G088400.1 Ceric.09G088400 not classified & original description: pacid=50587278... 0.07 OrthoFinder output from all 47 species
Dac_g22656 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g24883 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07537 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g19592 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g11654 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19773 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g01274 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp4g21420.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g03581 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g11293 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g64950 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g29381 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g46993 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g46994 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g62367 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0026.g009588 No alias not classified & original description: CDS=1-1422 0.03 OrthoFinder output from all 47 species
Tin_g13241 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g13242 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0009733 response to auxin IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003676 SAUR_fam 49 112
No external refs found!