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  5. Spa_g28966

Spa_g28966


Description : scaffold component *(LCAA) of Mg-protoporphyrin IX monomethylester cyclase complex & original description: none


Gene families : OG0006125 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006125_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g28966
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00179590 evm_27.TU.AmTr_v1... Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.02 OrthoFinder output from all 47 species
AT5G58250 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.03 OrthoFinder output from all 47 species
Aev_g02557 No alias scaffold component *(LCAA) of Mg-protoporphyrin IX... 0.03 OrthoFinder output from all 47 species
Mp5g08000.1 No alias scaffolding component LCAA of Mg-protoporphyrin IX... 0.03 OrthoFinder output from all 47 species
Msp_g10285 No alias scaffold component *(LCAA) of Mg-protoporphyrin IX... 0.02 OrthoFinder output from all 47 species
Pir_g07610 No alias scaffold component *(LCAA) of Mg-protoporphyrin IX... 0.02 OrthoFinder output from all 47 species
Tin_g09552 No alias scaffold component *(LCAA) of Mg-protoporphyrin IX... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR019616 Ycf54 121 209
No external refs found!