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  5. Spa_g28892

Spa_g28892


Description : not classified & original description: none


Gene families : OG0001478 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001478_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g28892
Cluster HCCA: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
Aop_g08099 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g19685 ATXYN1, RXF12 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g07345 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g077190.4.1 ATXYN1, RXF12,... endo-beta-1,4-xylanase 0.03 OrthoFinder output from all 47 species
Zm00001e012296_P001 ATXYN1, RXF12,... endo-beta-1,4-xylanase 0.04 OrthoFinder output from all 47 species
Zm00001e014621_P001 Zm00001e014621 endo-beta-1,4-xylanase 0.04 OrthoFinder output from all 47 species
Zm00001e016992_P001 ATXYN1, RXF12,... endo-beta-1,4-xylanase 0.01 OrthoFinder output from all 47 species
Zm00001e016997_P001 Zm00001e016997 endo-beta-1,4-xylanase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEP HCCA
InterPro domains Description Start Stop
IPR001000 GH10_dom 271 532
No external refs found!