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  5. Spa_g28816

Spa_g28816 (CJD1)


Aliases : CJD1

Description : not classified & original description: none


Gene families : OG0006135 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006135_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g28816

Target Alias Description ECC score Gene Family Method Actions
Cba_g33849 CJD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.03G028400.1 CJD1, Ceric.03G028400 not classified & original description: pacid=50572242... 0.03 OrthoFinder output from all 47 species
GSVIVT01023530001 CJD1 No description available 0.03 OrthoFinder output from all 47 species
Nbi_g30038 CJD1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0055.g014426 CJD1 not classified & original description: CDS=1-852 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008192 RNA guanylyltransferase activity IEP HCCA
MF GO:0008193 tRNA guanylyltransferase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0070568 guanylyltransferase activity IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR021788 CPP1-like 82 186
No external refs found!