- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : component *(NOT4) of mRNA deadenylation CCR4-NOT complex & original description: none
Gene families : OG0003273 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003273_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT2G28540 | No alias | RNA binding (RRM/RBD/RNP motifs) family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT5G60170 | No alias | RNA binding (RRM/RBD/RNP motifs) family protein | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g34034 | No alias | component *(NOT4) of mRNA deadenylation CCR4-NOT complex... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g09045 | No alias | component *(NOT4) of mRNA deadenylation CCR4-NOT complex... | 0.08 | OrthoFinder output from all 47 species | |
| Als_g29069 | No alias | component *(NOT4) of mRNA deadenylation CCR4-NOT complex... | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g13675 | No alias | component *(NOT4) of mRNA deadenylation CCR4-NOT complex... | 0.05 | OrthoFinder output from all 47 species | |
| Dde_g04458 | No alias | component *(NOT4) of mRNA deadenylation CCR4-NOT complex... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os12g01190.2 | LOC_Os12g01190 | component NOT4 of mRNA deadenylation CCR4-NOT complex | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g34846 | No alias | component *(NOT4) of mRNA deadenylation CCR4-NOT complex... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g37215 | No alias | component *(NOT4) of mRNA deadenylation CCR4-NOT complex... | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g07876 | No alias | component *(NOT4) of mRNA deadenylation CCR4-NOT complex... | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g11207 | No alias | component *(NOT4) of mRNA deadenylation CCR4-NOT complex... | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003729 | mRNA binding | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| CC | GO:0035145 | exon-exon junction complex | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000504 | RRM_dom | 131 | 192 |
| No external refs found! |