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  5. Spa_g26545

Spa_g26545


Description : regulatory protein *(ISTL) of ESCRT-mediated sorting & original description: none


Gene families : OG0000406 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000406_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g26545
Cluster HCCA: Cluster_194

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00036p00232910 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT4G32350 No alias Regulator of Vps4 activity in the MVB pathway protein 0.03 OrthoFinder output from all 47 species
Ala_g37253 No alias regulatory protein *(ISTL) of ESCRT-mediated sorting &... 0.04 OrthoFinder output from all 47 species
Als_g26297 No alias regulatory protein *(ISTL) of ESCRT-mediated sorting &... 0.03 OrthoFinder output from all 47 species
Ehy_g29519 No alias regulatory protein *(ISTL) of ESCRT-mediated sorting &... 0.03 OrthoFinder output from all 47 species
MA_10434372g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pnu_g10610 No alias regulatory protein *(ISTL) of ESCRT-mediated sorting &... 0.04 OrthoFinder output from all 47 species
Sam_g35772 No alias regulatory protein *(ISTL) of ESCRT-mediated sorting &... 0.03 OrthoFinder output from all 47 species
Spa_g12374 No alias regulatory protein *(ISTL) of ESCRT-mediated sorting &... 0.04 OrthoFinder output from all 47 species
Zm00001e034943_P001 Zm00001e034943 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0015031 protein transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR005061 Ist1 16 178
No external refs found!