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  5. Spa_g26324

Spa_g26324 (SPL1)


Aliases : SPL1

Description : SBP-type transcription factor & original description: none


Gene families : OG0001309 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001309_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g26324

Target Alias Description ECC score Gene Family Method Actions
AT1G20980 SPL1R2, ATSPL14,... squamosa promoter binding protein-like 14 0.02 OrthoFinder output from all 47 species
AT1G76580 No alias Squamosa promoter-binding protein-like (SBP domain)... 0.03 OrthoFinder output from all 47 species
AT3G60030 SPL12 squamosa promoter-binding protein-like 12 0.03 OrthoFinder output from all 47 species
Adi_g006611 SPL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g099813 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g35361 SPL1 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g14533 No alias SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07275 SPL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g29191 SPL1R2, ATSPL14,... SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g31923 SPL1R2, ATSPL14,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g50671 SPL1 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08355 No alias SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g13690 SPL12 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene51465.t1 SPL1, Aspi01Gene51465 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g31507 SPL12 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G021200.1 Ceric.01G021200 SBP-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.03G050900.1 Ceric.03G050900 SBP-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.10G052200.1 SPL12, Ceric.10G052200 SBP-type transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Dcu_g10806 No alias SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13220 SPL12 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Gb_00228 SPL1 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
MA_10427464g0010 No alias transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Mp1g13640.1 No alias transcription factor (SBP) 0.04 OrthoFinder output from all 47 species
Nbi_g08894 No alias SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g02484 SPL1 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g13310 SPL12 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0093.g019102 SPL1 SBP-type transcription factor & original description: CDS=1-3150 0.03 OrthoFinder output from all 47 species
Tin_g12976 No alias SBP-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e003571_P002 Zm00001e003571 transcription factor (SBP) 0.05 OrthoFinder output from all 47 species
Zm00001e006252_P001 SPL1, Zm00001e006252 transcription factor (SBP) 0.04 OrthoFinder output from all 47 species
Zm00001e011712_P002 SPL1, Zm00001e011712 transcription factor (SBP) 0.05 OrthoFinder output from all 47 species
Zm00001e017451_P001 SPL1, Zm00001e017451 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004333 SBP_dom 191 264
IPR002110 Ankyrin_rpt 909 1009
No external refs found!