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  5. Spa_g26198

Spa_g26198


Description : not classified & original description: none


Gene families : OG0000592 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000592_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g26198

Target Alias Description ECC score Gene Family Method Actions
Cba_g15359 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g11534 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e018599_P001 Zm00001e018599 PH, RCC1 and FYVE domains-containing protein 1... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004560 alpha-L-fucosidase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
MF GO:0015928 fucosidase activity IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
InterPro domains Description Start Stop
IPR027988 BRX_N 906 933
IPR000408 Reg_chr_condens 425 473
IPR000408 Reg_chr_condens 370 421
IPR000408 Reg_chr_condens 540 589
IPR000408 Reg_chr_condens 319 365
IPR000408 Reg_chr_condens 488 537
IPR000408 Reg_chr_condens 594 641
IPR000306 Znf_FYVE 645 711
IPR013591 Brevis_radix_dom 1103 1158
IPR001849 PH_domain 15 124
No external refs found!