1. Home
  2. Species
  3. Stenochlaena palustris
  4. Sequence
  5. Spa_g26052

Spa_g26052 (EST3, MRP4, ATMRP4, ABCC4)


Aliases : EST3, MRP4, ATMRP4, ABCC4

Description : subfamily ABCC transporter & original description: none


Gene families : OG0000037 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g26052

Target Alias Description ECC score Gene Family Method Actions
Aop_g29615 MRP6, ATMRP6, ABCC8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene04341.t1 MRP6, ATMRP6,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05227.t2 ATMRP12, MRP12,... EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene30342.t1 MRP6, ATMRP6,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g60930 MRP6, ATMRP6, ABCC8 subfamily ABCC transporter & original description: none 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000718.1 AtABCC2, ABCC2,... ABC transporter C family member 2 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dac_g40707 EST3, MRP4, ATMRP4, ABCC4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g26277 EST3, MRP4, ATMRP4, ABCC4 subfamily ABCC transporter & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0172.g024424 EST3, MRP4, ATMRP4, ABCC4 subfamily ABCC transporter & original description: CDS=1-4845 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s2174.g028288 MRP15, ABCC15, ATMRP15 subfamily ABCC transporter & original description: CDS=45-1331 0.02 OrthoFinder output from all 47 species
Sam_g39021 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
MF GO:0140359 ABC-type transporter activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 1280 1428
IPR003439 ABC_transporter-like_ATP-bd 648 780
IPR011527 ABC1_TM_dom 316 581
IPR011527 ABC1_TM_dom 946 1182
No external refs found!