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  5. Spa_g25827

Spa_g25827


Description : not classified & original description: none


Gene families : OG0002255 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002255_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g25827
Cluster HCCA: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
Ala_g05798 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g18997 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os03g63040.1 LOC_Os03g63040 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g09634 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp3g15600.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pnu_g21009 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc12g098463.1.1 Solyc12g098463 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Tin_g11603 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!