Aliases : ERD2B
Description : COPI trafficking K/HDEL-signature cargo receptor & original description: none
Gene families : OG0002105 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002105_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT3G25040 | ERD2B | endoplasmic reticulum retention defective 2B | 0.03 | OrthoFinder output from all 47 species | |
Ala_g07087 | ERD2B | COPI trafficking K/HDEL-signature cargo receptor &... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os04g30800.2 | ERD2B, LOC_Os04g30800 | ERD2 COPI trafficking K/HDEL-signature receptor | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os05g45310.1 | ERD2, ATERD2,... | ERD2 COPI trafficking K/HDEL-signature receptor | 0.02 | OrthoFinder output from all 47 species | |
MA_20587g0010 | ERD2B | ERD2 COPI trafficking K/HDEL-signature receptor | 0.02 | OrthoFinder output from all 47 species | |
Mp4g03440.1 | ERD2B | ERD2 COPI trafficking K/HDEL-signature receptor | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g05082 | ERD2B | COPI trafficking K/HDEL-signature cargo receptor &... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0006621 | protein retention in ER lumen | IEA | Interproscan |
CC | GO:0016020 | membrane | IEA | Interproscan |
MF | GO:0046923 | ER retention sequence binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000786 | nucleosome | IEP | HCCA |
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003677 | DNA binding | IEP | HCCA |
MF | GO:0003824 | catalytic activity | IEP | HCCA |
MF | GO:0004518 | nuclease activity | IEP | HCCA |
MF | GO:0004519 | endonuclease activity | IEP | HCCA |
MF | GO:0004521 | endoribonuclease activity | IEP | HCCA |
MF | GO:0004527 | exonuclease activity | IEP | HCCA |
MF | GO:0004540 | ribonuclease activity | IEP | HCCA |
BP | GO:0006325 | chromatin organization | IEP | HCCA |
BP | GO:0006334 | nucleosome assembly | IEP | HCCA |
BP | GO:0006338 | chromatin remodeling | IEP | HCCA |
BP | GO:0006629 | lipid metabolic process | IEP | HCCA |
BP | GO:0006631 | fatty acid metabolic process | IEP | HCCA |
BP | GO:0006633 | fatty acid biosynthetic process | IEP | HCCA |
MF | GO:0008408 | 3'-5' exonuclease activity | IEP | HCCA |
BP | GO:0008610 | lipid biosynthetic process | IEP | HCCA |
BP | GO:0016053 | organic acid biosynthetic process | IEP | HCCA |
MF | GO:0016787 | hydrolase activity | IEP | HCCA |
MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | HCCA |
MF | GO:0016790 | thiolester hydrolase activity | IEP | HCCA |
BP | GO:0022607 | cellular component assembly | IEP | HCCA |
BP | GO:0032787 | monocarboxylic acid metabolic process | IEP | HCCA |
CC | GO:0032993 | protein-DNA complex | IEP | HCCA |
BP | GO:0034728 | nucleosome organization | IEP | HCCA |
BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
BP | GO:0044255 | cellular lipid metabolic process | IEP | HCCA |
CC | GO:0044815 | DNA packaging complex | IEP | HCCA |
BP | GO:0046394 | carboxylic acid biosynthetic process | IEP | HCCA |
BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
BP | GO:0065004 | protein-DNA complex assembly | IEP | HCCA |
BP | GO:0071824 | protein-DNA complex subunit organization | IEP | HCCA |
BP | GO:0072330 | monocarboxylic acid biosynthetic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000133 | ER_ret_rcpt | 28 | 171 |
No external refs found! |