Zm00001d043700 (GRMZM2G111611)

Aliases : GRMZM2G111611

Description : 31.4 cell.vesicle transport Encodes a member of SNARE gene family. Homologous with yeast VTI1 and is involved in vesicle transport. Mutant alleles such as sgr4/zig are defective in the shoots response to gravity resulting in a zigzag growth pattern of the stem. Involved in protein trafficking to lytic vacuoles. Can conditionally substitute VTI12 in protein storage vacuole trafficking when plants are devoid of VTI12. SHOOT GRAVITROPSIM 4 (SGR4)

Gene families : OG_01_0002142 (Gene family) Phylogenetic Tree(s): OG0002142_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR network (cutoff 100): Zm00001d043700
Cluster HCCA cluster: Cluster_154

Target Alias Description ECC score Gene Family Method Actions
AT5G39510 SGR4, ZIG1,... Vesicle transport v-SNARE family protein 0.02 Gene family
GSVIVT01007964001 No alias 31.4 cell.vesicle transport Encodes a member of SNARE... 0.04 Gene family
GSVIVT01012494001 No alias No description available 0.03 Gene family
LOC_Os01g51120 Os01g0707300 31.4 cell.vesicle transport Encodes a member of SNARE... 0.02 Gene family
Smo146421 PACid_15401928 No description available 0.02 Gene family
Solyc05g013050.3.1 Solyc05g013050.3 No description available 0.05 Gene family

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA InterProScan
CC GO:0016020 membrane IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007705 Vesicle_trsprt_v-SNARE_N 12 95
No external refs found!