Spa_g25154


Description : not classified & original description: none


Gene families : OG0004370 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004370_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g25154

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00237990 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00066p00160870 evm_27.TU.AmTr_v1... No description available 0.06 OrthoFinder output from all 47 species
AT3G02640 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.1 OrthoFinder output from all 47 species
AT5G16250 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.1 OrthoFinder output from all 47 species
AT5G36710 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.13 OrthoFinder output from all 47 species
AT5G36800 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.13 OrthoFinder output from all 47 species
Aev_g22298 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g32668 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Als_g04167 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04668 No alias not classified & original description: none 0.14 OrthoFinder output from all 47 species
Aop_g07436 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Aspi01Gene13483.t1 Aspi01Gene13483 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene46914.t1 Aspi01Gene46914 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aspi01Gene67581.t1 Aspi01Gene67581 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g17678 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ceric.28G015700.1 Ceric.28G015700 not classified & original description: pacid=50570153... 0.07 OrthoFinder output from all 47 species
Dac_g14615 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Dcu_g00561 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g05252 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
GSVIVT01007183001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os01g67110.1 LOC_Os01g67110 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os04g41900.1 LOC_Os04g41900 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
LOC_Os05g43140.1 LOC_Os05g43140 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g00262 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Len_g07623 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Lfl_g31204 No alias not classified & original description: none 0.13 OrthoFinder output from all 47 species
MA_488033g0010 No alias no hits & (original description: none) 0.13 OrthoFinder output from all 47 species
MA_7639g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g04591 No alias not classified & original description: none 0.14 OrthoFinder output from all 47 species
Nbi_g39588 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ore_g17372 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Pir_g15390 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g00575 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Solyc05g055680.4.1 Solyc05g055680 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Zm00001e007700_P001 Zm00001e007700 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e018978_P001 Zm00001e018978 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Zm00001e028566_P001 Zm00001e028566 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e032081_P001 Zm00001e032081 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!