- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : not classified & original description: none
Gene families : OG0000102 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000102_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00090p00148990 | SYD, CHR3,... | Chromatin organisation.chromatin remodeling... | 0.04 | OrthoFinder output from all 47 species | |
| AT2G13370 | CHR5 | chromatin remodeling 5 | 0.03 | OrthoFinder output from all 47 species | |
| AT2G25170 | PKL, GYM, CHR6,... | chromatin remodeling factor CHD3 (PICKLE) | 0.02 | OrthoFinder output from all 47 species | |
| AT2G28290 | SYD, CHR3 | P-loop containing nucleoside triphosphate hydrolases... | 0.05 | OrthoFinder output from all 47 species | |
| AT5G44800 | PKR1, CHR4 | chromatin remodeling 4 | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g004816 | SYD, CHR3 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g011534 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g082550 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Adi_g107365 | CHR5 | component *(CHR5) of SAGA transcription co-activator... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g02726 | CHR5 | component *(CHR5) of SAGA transcription co-activator... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g17670 | PKR1, CHR4 | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g27421 | SYD, CHR3 | SMARCA component *(SYD/BRM/MINU) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g36219 | ATCHR12 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g56902 | CHR5 | component *(CHR5) of SAGA transcription co-activator... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g13607 | CHR5 | component *(CHR5) of SAGA transcription co-activator... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene24030.t1 | CHR5, Aspi01Gene24030 | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aspi01Gene25758.t1 | SYD, CHR3,... | SMARCA component *(SYD/BRM/MINU) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene50700.t2 | PKR1, CHR4,... | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene52538.t1 | PKL, GYM, CHR6,... | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene62384.t3 | PKR1, CHR4,... | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.07 | OrthoFinder output from all 47 species | |
| Azfi_s0435.g069908 | CHR11 | ATPase component *(CHR11/CHR17) of ISWI chromatin... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g06040 | CHR5 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g06803 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g23143 | PKR1, CHR4 | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g33369 | CHR5 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.1Z205000.1 | PKR1, CHR4,... | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.36G015700.1 | PKL, GYM, CHR6,... | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000144.188 | CHR01, CHR1,... | ATP-dependent DNA helicase DDM1 OS=Arabidopsis thaliana | 0.01 | OrthoFinder output from all 47 species | |
| Dcu_g02069 | PKR1, CHR4 | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g03342 | ATCHR12 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g19433 | ATCHR12 | SMARCA component *(SYD/BRM/MINU) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01017820001 | SYD, CHR3 | Chromatin organisation.chromatin remodeling... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os05g05230.1 | ATCHR12, LOC_Os05g05230 | chromatin remodeling factor (Snf2) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os07g31450.1 | PKR1, CHR4,... | chromatin remodeling factor (Chd3/Mi-2) | 0.03 | OrthoFinder output from all 47 species | |
| Len_g01407 | PKL, GYM, CHR6,... | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g11421 | SYD, CHR3 | SMARCA component *(SYD/BRM/MINU) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g04300 | SYD, CHR3 | SMARCA component *(SYD/BRM/MINU) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g16058 | CHR5 | component *(CHR5) of SAGA transcription co-activator... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g30624 | PKL, GYM, CHR6,... | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.03 | OrthoFinder output from all 47 species | |
| MA_10437250g0010 | No alias | Probable helicase CHR10 OS=Arabidopsis thaliana... | 0.04 | OrthoFinder output from all 47 species | |
| Mp5g24460.1 | PKL, GYM, CHR6,... | chromatin remodeling factor (Chd3/Mi-2) | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g02510 | CHR5 | component *(CHR5) of SAGA transcription co-activator... | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g12701 | CHR11 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c10_2280V3.1 | PKL, GYM, CHR6,... | chromatin remodeling 4 | 0.01 | OrthoFinder output from all 47 species | |
| Pp3c20_4650V3.1 | ATCHR12, Pp3c20_4650 | Homeotic gene regulator | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g04716 | CHR5 | component *(CHR5) of SAGA transcription co-activator... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0004.g002414 | PKR1, CHR4 | CHD3-type chromatin remodeling factor *(PKL/PKR) &... | 0.05 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0089.g018707 | SYD, CHR3 | SMARCA component *(SYD/BRM/MINU) & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0168.g024260 | CHR01, CHR1,... | not classified & original description: CDS=245-1573 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g16204 | No alias | SMARCA component *(SYD/BRM/MINU) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g29220 | No alias | component *(CHR5) of SAGA transcription co-activator... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc02g068560.3.1 | PKR1, CHR4,... | chromatin remodeling factor (Chd3/Mi-2) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc06g065730.3.1 | PKL, GYM, CHR6,... | chromatin remodeling factor (Chd3/Mi-2) | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g02554 | PKL, GYM, CHR6,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g03855 | CHR17 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g06972 | SYD, CHR3 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g36192 | CHR11 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e017643_P001 | CHR17, Zm00001e017643 | chromatin remodeling factor (Iswi) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0004402 | histone acetyltransferase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| CC | GO:0005634 | nucleus | IEP | HCCA |
| BP | GO:0006325 | chromatin organization | IEP | HCCA |
| BP | GO:0006338 | chromatin remodeling | IEP | HCCA |
| BP | GO:0006473 | protein acetylation | IEP | HCCA |
| BP | GO:0006475 | internal protein amino acid acetylation | IEP | HCCA |
| MF | GO:0008080 | N-acetyltransferase activity | IEP | HCCA |
| BP | GO:0016043 | cellular component organization | IEP | HCCA |
| MF | GO:0016407 | acetyltransferase activity | IEP | HCCA |
| MF | GO:0016410 | N-acyltransferase activity | IEP | HCCA |
| BP | GO:0016570 | histone modification | IEP | HCCA |
| BP | GO:0016573 | histone acetylation | IEP | HCCA |
| MF | GO:0016746 | acyltransferase activity | IEP | HCCA |
| MF | GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | IEP | HCCA |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
| BP | GO:0018205 | peptidyl-lysine modification | IEP | HCCA |
| BP | GO:0018393 | internal peptidyl-lysine acetylation | IEP | HCCA |
| BP | GO:0018394 | peptidyl-lysine acetylation | IEP | HCCA |
| MF | GO:0034212 | peptide N-acetyltransferase activity | IEP | HCCA |
| CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043543 | protein acylation | IEP | HCCA |
| MF | GO:0061733 | peptide-lysine-N-acetyltransferase activity | IEP | HCCA |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |