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  5. Spa_g24169

Spa_g24169


Description : not classified & original description: none


Gene families : OG0001667 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001667_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g24169

Target Alias Description ECC score Gene Family Method Actions
Adi_g067776 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g078573 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g11147 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.26G049800.1 Ceric.26G049800 not classified & original description: pacid=50599213... 0.05 OrthoFinder output from all 47 species
Ceric.36G006800.1 Ceric.36G006800 not classified & original description: pacid=50568928... 0.06 OrthoFinder output from all 47 species
Ehy_g05682 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01003340001 No alias No description available 0.06 OrthoFinder output from all 47 species
GSVIVT01037751001 No alias No description available 0.03 OrthoFinder output from all 47 species
MA_126387g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_140669g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g02317 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0113.g020819 No alias not classified & original description: CDS=1-795 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006072 glycerol-3-phosphate metabolic process IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
CC GO:0008303 caspase complex IEP HCCA
BP GO:0016255 attachment of GPI anchor to protein IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
CC GO:0042765 GPI-anchor transamidase complex IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
BP GO:0046168 glycerol-3-phosphate catabolic process IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0052646 alditol phosphate metabolic process IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR014876 DEK_C 3 56
IPR003121 SWIB_MDM2_domain 162 233
IPR003121 SWIB_MDM2_domain 274 347
No external refs found!