Spa_g24144


Description : not classified & original description: none


Gene families : OG0000686 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000686_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g24144

Target Alias Description ECC score Gene Family Method Actions
Adi_g019856 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g080555 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g080921 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g16534 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05306 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07058 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Als_g50929 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g57434 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g01047 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aop_g01520 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g01689 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Aop_g06488 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Aop_g26629 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0057.g034355 No alias not classified & original description: CDS=1-816 0.06 OrthoFinder output from all 47 species
Cba_g05700 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07904 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G043200.1 Ceric.01G043200 not classified & original description: pacid=50591508... 0.03 OrthoFinder output from all 47 species
Ceric.15G028500.1 Ceric.15G028500 not classified & original description: pacid=50639808... 0.03 OrthoFinder output from all 47 species
Ceric.17G001400.1 Ceric.17G001400 not classified & original description: pacid=50618654... 0.1 OrthoFinder output from all 47 species
Ceric.20G092600.1 Ceric.20G092600 not classified & original description: pacid=50566798... 0.03 OrthoFinder output from all 47 species
Ceric.24G005300.1 Ceric.24G005300 not classified & original description: pacid=50628647... 0.06 OrthoFinder output from all 47 species
Dac_g02526 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g04048 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g07703 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g13705 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g16647 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g02614 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g03656 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g08227 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16637 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Len_g02578 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g05093 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g10666 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g05376 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Msp_g08512 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g01629 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g23196 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02976 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g15469 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g19010 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g33466 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000393 No alias not classified & original description: CDS=1-618 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004861 No alias not classified & original description: CDS=1-531 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0098.g019487 No alias not classified & original description: CDS=286-816 0.03 OrthoFinder output from all 47 species
Sam_g07534 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sam_g11814 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g11815 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g14321 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g18557 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g23644 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g26453 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g28488 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g00222 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Tin_g00449 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g02367 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
MF GO:0008097 5S rRNA binding IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!