Spa_g24047

Description : component *(RBM7) of Nuclear Exosome Targeting (NEXT) activation complex & original description: none

Gene families : OG0002873 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002873_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Spa_g24047

Target	Alias	Description	ECC score	Gene Family Method
AT4G10110	No alias	RNA-binding (RRM/RBD/RNP motifs) family protein	0.03	OrthoFinder output from all 47 species
Als_g13601	No alias	component *(RBM7) of Nuclear Exosome Targeting (NEXT)...	0.03	OrthoFinder output from all 47 species
Aspi01Gene15106.t1	Aspi01Gene15106	component *(RBM7) of Nuclear Exosome Targeting (NEXT)...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0002161	aminoacyl-tRNA editing activity	IEP	HCCA
CC	GO:0005737	cytoplasm	IEP	HCCA
MF	GO:0016829	lyase activity	IEP	HCCA
MF	GO:0051499	D-aminoacyl-tRNA deacylase activity	IEP	HCCA
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	HCCA
MF	GO:0140098	catalytic activity, acting on RNA	IEP	HCCA
MF	GO:0140101	catalytic activity, acting on a tRNA	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	9	70

External Links

No external refs found!