Description : component *(Sm-D3) of U1/U2/U4/U5-associated Sm accessory ribonucleoprotein complex & original description: none
Gene families : OG0003441 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003441_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Spa_g23863 | |
Cluster | HCCA: Cluster_56 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00001p00047670 | evm_27.TU.AmTr_v1... | RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... | 0.04 | OrthoFinder output from all 47 species | |
Ceric.09G101500.1 | Ceric.09G101500 | component *(Sm-D3) of U1/U2/U4/U5-associated Sm... | 0.04 | OrthoFinder output from all 47 species | |
Dac_g33659 | No alias | component *(Sm-D3) of U1/U2/U4/U5-associated Sm... | 0.03 | OrthoFinder output from all 47 species | |
Gb_24192 | No alias | component Sm-D3 of U1/U2/U4/U5-associated Sm accessory... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os02g01250.1 | LOC_Os02g01250 | component Sm-D3 of U1/U2/U4/U5-associated Sm accessory... | 0.03 | OrthoFinder output from all 47 species | |
Mp1g11210.1 | No alias | component Sm-D3 of U1/U2/U4/U5-associated Sm accessory... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
MF | GO:0008270 | zinc ion binding | IEP | HCCA |
MF | GO:0043169 | cation binding | IEP | HCCA |
MF | GO:0046872 | metal ion binding | IEP | HCCA |
MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001163 | LSM_dom_euk/arc | 39 | 102 |
No external refs found! |