Description : component *(eL20) of large ribosomal-subunit (LSU) proteome & original description: none
Gene families : OG0012579 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): OG0012579_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Aev_g31349 | No alias | component *(eL20) of large ribosomal-subunit (LSU)... | 0.07 | OrthoFinder output from all 39 species | |
Ala_g10220 | No alias | component *(eL20) of large ribosomal-subunit (LSU)... | 0.13 | OrthoFinder output from all 39 species | |
Ala_g20515 | No alias | component *(eL20) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 39 species | |
Ala_g20516 | No alias | component *(eL20) of large ribosomal-subunit (LSU)... | 0.01 | OrthoFinder output from all 39 species | |
Cba_g10930 | No alias | component *(eL20) of large ribosomal-subunit (LSU)... | 0.17 | OrthoFinder output from all 39 species | |
Cba_g10931 | No alias | component *(eL20) of large ribosomal-subunit (LSU)... | 0.18 | OrthoFinder output from all 39 species | |
Cba_g26370 | No alias | component *(eL20) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 39 species | |
Dcu_g15553 | No alias | component *(eL20) of large ribosomal-subunit (LSU)... | 0.18 | OrthoFinder output from all 39 species | |
Dcu_g19592 | No alias | component *(eL20) of large ribosomal-subunit (LSU)... | 0.27 | OrthoFinder output from all 39 species | |
Dcu_g39299 | No alias | component *(eL20) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 39 species | |
Dde_g31874 | No alias | component *(eL20) of large ribosomal-subunit (LSU)... | 0.12 | OrthoFinder output from all 39 species | |
Dde_g31875 | No alias | component *(eL20) of large ribosomal-subunit (LSU)... | 0.25 | OrthoFinder output from all 39 species | |
Tin_g07974 | No alias | component *(eL20) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 39 species | |
Tin_g07975 | No alias | component *(eL20) of large ribosomal-subunit (LSU)... | 0.15 | OrthoFinder output from all 39 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
MF | GO:0003723 | RNA binding | IEP | HCCA |
MF | GO:0004807 | triose-phosphate isomerase activity | IEP | HCCA |
MF | GO:0005199 | structural constituent of cell wall | IEP | HCCA |
MF | GO:0005488 | binding | IEP | HCCA |
CC | GO:0005618 | cell wall | IEP | HCCA |
BP | GO:0005975 | carbohydrate metabolic process | IEP | HCCA |
BP | GO:0005984 | disaccharide metabolic process | IEP | HCCA |
BP | GO:0005991 | trehalose metabolic process | IEP | HCCA |
BP | GO:0005992 | trehalose biosynthetic process | IEP | HCCA |
MF | GO:0008097 | 5S rRNA binding | IEP | HCCA |
BP | GO:0009311 | oligosaccharide metabolic process | IEP | HCCA |
BP | GO:0009312 | oligosaccharide biosynthetic process | IEP | HCCA |
MF | GO:0009678 | pyrophosphate hydrolysis-driven proton transmembrane transporter activity | IEP | HCCA |
MF | GO:0015078 | proton transmembrane transporter activity | IEP | HCCA |
MF | GO:0015399 | primary active transmembrane transporter activity | IEP | HCCA |
BP | GO:0016051 | carbohydrate biosynthetic process | IEP | HCCA |
MF | GO:0016830 | carbon-carbon lyase activity | IEP | HCCA |
MF | GO:0016832 | aldehyde-lyase activity | IEP | HCCA |
MF | GO:0016860 | intramolecular oxidoreductase activity | IEP | HCCA |
MF | GO:0016861 | intramolecular oxidoreductase activity, interconverting aldoses and ketoses | IEP | HCCA |
MF | GO:0019829 | ATPase-coupled monoatomic cation transmembrane transporter activity | IEP | HCCA |
MF | GO:0019842 | vitamin binding | IEP | HCCA |
MF | GO:0019843 | rRNA binding | IEP | HCCA |
MF | GO:0022804 | active transmembrane transporter activity | IEP | HCCA |
MF | GO:0022853 | active monoatomic ion transmembrane transporter activity | IEP | HCCA |
MF | GO:0022890 | inorganic cation transmembrane transporter activity | IEP | HCCA |
CC | GO:0030312 | external encapsulating structure | IEP | HCCA |
MF | GO:0030976 | thiamine pyrophosphate binding | IEP | HCCA |
BP | GO:0034220 | monoatomic ion transmembrane transport | IEP | HCCA |
BP | GO:0034637 | cellular carbohydrate biosynthetic process | IEP | HCCA |
MF | GO:0036094 | small molecule binding | IEP | HCCA |
MF | GO:0042625 | ATPase-coupled ion transmembrane transporter activity | IEP | HCCA |
MF | GO:0042626 | ATPase-coupled transmembrane transporter activity | IEP | HCCA |
MF | GO:0043167 | ion binding | IEP | HCCA |
MF | GO:0043168 | anion binding | IEP | HCCA |
BP | GO:0044262 | cellular carbohydrate metabolic process | IEP | HCCA |
MF | GO:0044769 | ATPase activity, coupled to transmembrane movement of ions, rotational mechanism | IEP | HCCA |
BP | GO:0046351 | disaccharide biosynthetic process | IEP | HCCA |
MF | GO:0046961 | proton-transporting ATPase activity, rotational mechanism | IEP | HCCA |
MF | GO:0050997 | quaternary ammonium group binding | IEP | HCCA |
MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
MF | GO:1901681 | sulfur compound binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR023573 | Ribosomal_L18a//L18Ae/LX | 5 | 127 |
No external refs found! |