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  5. Spa_g22300

Spa_g22300 (TMN1, AtTMN1)


Aliases : TMN1, AtTMN1

Description : not classified & original description: none


Gene families : OG0000505 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000505_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g22300

Target Alias Description ECC score Gene Family Method Actions
AT1G08350 No alias Endomembrane protein 70 protein family 0.03 OrthoFinder output from all 47 species
AT1G10950 TMN1, AtTMN1 transmembrane nine 1 0.07 OrthoFinder output from all 47 species
AT2G01970 No alias Endomembrane protein 70 protein family 0.04 OrthoFinder output from all 47 species
AT5G37310 No alias Endomembrane protein 70 protein family 0.02 OrthoFinder output from all 47 species
Adi_g057368 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18477 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0509.g074704 TMN1, AtTMN1 not classified & original description: CDS=1-1740 0.03 OrthoFinder output from all 47 species
Cba_g26284 TMN1, AtTMN1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.22G054000.1 Ceric.22G054000 not classified & original description: pacid=50613875... 0.03 OrthoFinder output from all 47 species
Ceric.26G022100.1 TMN1, AtTMN1,... not classified & original description: pacid=50599543... 0.03 OrthoFinder output from all 47 species
Ceric.34G054800.1 TMN1, AtTMN1,... not classified & original description: pacid=50624162... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000459.14 No alias Transmembrane 9 superfamily member 3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020780.24 No alias Transmembrane 9 superfamily member 2 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Cre01.g024350 No alias Transmembrane 9 superfamily member 2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Dcu_g08865 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g10047 TMN1, AtTMN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g10048 TMN1, AtTMN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03386 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01011574001 No alias Transmembrane 9 superfamily member 2 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
LOC_Os02g34690.1 TMN1, AtTMN1,... Transmembrane 9 superfamily member 1 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
LOC_Os03g13380.1 LOC_Os03g13380 Transmembrane 9 superfamily member 3 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os11g07910.1 TMN1, AtTMN1,... Transmembrane 9 superfamily member 1 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
LOC_Os12g07670.1 TMN1, AtTMN1,... Transmembrane 9 superfamily member 1 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Len_g19351 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10431134g0010 TMN1, AtTMN1 Transmembrane 9 superfamily member 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
MA_10431450g0030 No alias Transmembrane 9 superfamily member 4 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp3g06160.1 No alias Transmembrane 9 superfamily member 2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp3g07580.1 No alias Transmembrane 9 superfamily member 2 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Nbi_g02238 TMN1, AtTMN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g55432 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Smo170330 No alias Transmembrane 9 superfamily member 2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc01g103930.3.1 TMN1, AtTMN1,... Transmembrane 9 superfamily member 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc04g014570.3.1 Solyc04g014570 Transmembrane 9 superfamily member 3 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc06g074310.4.1 Solyc06g074310 Transmembrane 9 superfamily member 5 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc10g044480.2.1 TMN1, AtTMN1,... Transmembrane 9 superfamily member 1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc11g022540.3.1 TMN1, AtTMN1,... Transmembrane 9 superfamily member 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Tin_g06605 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07333 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14792 TMN1, AtTMN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000978_P002 Zm00001e000978 Transmembrane 9 superfamily member 2 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e008994_P001 TMN1, AtTMN1,... Transmembrane 9 superfamily member 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e014799_P002 TMN1, AtTMN1,... Transmembrane 9 superfamily member 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e018414_P001 TMN1, AtTMN1,... Transmembrane 9 superfamily member 1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e039502_P001 TMN1, AtTMN1,... Transmembrane 9 superfamily member 1 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016197 endosomal transport IEP HCCA
BP GO:0016482 cytosolic transport IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0042147 retrograde transport, endosome to Golgi IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR004240 EMP70 55 549
No external refs found!