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  5. Aev_g21090

Aev_g21090


Description : homologous recombination repair factor *(MDC1) & original description: none


Gene families : OG0002706 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002706_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g21090

Target Alias Description ECC score Gene Family Method Actions
Ala_g14624 No alias homologous recombination repair factor *(MDC1) &... 0.02 OrthoFinder output from all 47 species
Als_g18067 No alias homologous recombination repair factor *(MDC1) &... 0.03 OrthoFinder output from all 47 species
Aob_g31847 No alias homologous recombination repair factor *(MDC1) &... 0.02 OrthoFinder output from all 47 species
Ceric.29G085700.1 Ceric.29G085700 homologous recombination repair factor *(MDC1) &... 0.03 OrthoFinder output from all 47 species
Lfl_g13951 No alias homologous recombination repair factor *(MDC1) &... 0.04 OrthoFinder output from all 47 species
MA_10427227g0050 No alias MDC1-like homologous recombination repair factor 0.02 OrthoFinder output from all 47 species
Ppi_g42098 No alias homologous recombination repair factor *(MDC1) &... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003909 DNA ligase activity IEP HCCA
MF GO:0003910 DNA ligase (ATP) activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001357 BRCT_dom 1221 1311
No external refs found!