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  5. Spa_g20559

Spa_g20559


Description : linker histone *(H1) & original description: none


Gene families : OG0000310 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000310_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g20559

Target Alias Description ECC score Gene Family Method Actions
Adi_g047348 HIS1-3 linker histone *(H1) & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g054553 No alias linker histone *(H1) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene11879.t1 HIS1-3, Aspi01Gene11879 linker histone *(H1) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene11880.t1 HIS1-3, Aspi01Gene11880 linker histone *(H1) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene25496.t1 HIS1-3, Aspi01Gene25496 linker histone *(H1) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene58753.t1 Aspi01Gene58753 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.30G041600.1 Ceric.30G041600 linker histone *(H1) & original description:... 0.02 OrthoFinder output from all 47 species
Dcu_g00585 HIS1-3 linker histone *(H1) & original description: none 0.07 OrthoFinder output from all 47 species
Ehy_g05502 HIS1-3 linker histone *(H1) & original description: none 0.03 OrthoFinder output from all 47 species
MA_173054g0010 HIS1-3 linker histone (H1) 0.04 OrthoFinder output from all 47 species
Msp_g16562 No alias linker histone *(H1) & original description: none 0.02 OrthoFinder output from all 47 species
Smo27494 No alias Chromatin organisation.histones.H1 linker histone 0.02 OrthoFinder output from all 47 species
Spa_g09324 HIS1-3 linker histone *(H1) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e007189_P001 HIS1-3, Zm00001e007189 linker histone (H1) 0.03 OrthoFinder output from all 47 species
Zm00001e032965_P005 Zm00001e032965 linker histone (H1) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006334 nucleosome assembly IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP HCCA
BP GO:0001932 regulation of protein phosphorylation IEP HCCA
BP GO:0019220 regulation of phosphate metabolic process IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0019900 kinase binding IEP HCCA
MF GO:0019901 protein kinase binding IEP HCCA
BP GO:0031399 regulation of protein modification process IEP HCCA
BP GO:0042325 regulation of phosphorylation IEP HCCA
BP GO:0043549 regulation of kinase activity IEP HCCA
BP GO:0045859 regulation of protein kinase activity IEP HCCA
BP GO:0050790 regulation of catalytic activity IEP HCCA
BP GO:0051174 regulation of phosphorus metabolic process IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0051338 regulation of transferase activity IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0065009 regulation of molecular function IEP HCCA
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP HCCA
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP HCCA
InterPro domains Description Start Stop
IPR005818 Histone_H1/H5_H15 38 100
No external refs found!