Spa_g20435 (VAC1, ECB2, ATECB2)


Aliases : VAC1, ECB2, ATECB2

Description : not classified & original description: none


Gene families : OG0002372 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002372_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g20435

Target Alias Description ECC score Gene Family Method Actions
Adi_g003214 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005239 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g007414 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30546 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23941 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g28682 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Aop_g29803 EMB2744 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g33549 MEF19 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g68075 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g68548 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dac_g43203 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g06816 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17904 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g06858 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07606 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g14697 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g18121 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g22793 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g32864 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g37491 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g03794 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g08531 OTP84 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g10605 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28091 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28200 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28508 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g29867 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g29894 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g30795 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g33641 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g33944 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g34458 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g47110 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g32623 OTP82 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g03333 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g57928 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05532 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g57143 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g22935 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g25557 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g48804 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g49147 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g17798 CRR21 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g19216 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g27510 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 122 170
No external refs found!