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  5. Spa_g20030

Spa_g20030 (EIF4A-2)


Aliases : EIF4A-2

Description : mRNA unwinding factor *(eIF4A)) & original description: none


Gene families : OG0000532 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000532_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g20030

Target Alias Description ECC score Gene Family Method Actions
Adi_g114923 EIF4A-2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04253 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.04 OrthoFinder output from all 47 species
Cre03.g199647 EIF4A-III RNA processing.RNA quality control Exon Junction complex... 0.03 OrthoFinder output from all 47 species
Dac_g10266 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c21_9040V3.1 EIF4A-III, Pp3c21_9040 eukaryotic initiation factor 4A-III 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002703 No alias not classified & original description: CDS=1-279 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0278.g027081 EIF4A-III not classified & original description: CDS=108-1172 0.04 OrthoFinder output from all 47 species
Solyc12g096000.2.1 EIF4A-2, Solyc12g096000 mRNA unwinding factor (eIF4A) 0.03 OrthoFinder output from all 47 species
Tin_g05567 EIF4A-2 mRNA unwinding factor *(eIF4A)) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR001650 Helicase_C 266 374
IPR011545 DEAD/DEAH_box_helicase_dom 65 226
No external refs found!