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  5. Spa_g19377

Spa_g19377


Description : nuclear-encoded organellar RNA polymerase *(NEP) & original description: none


Gene families : OG0002420 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002420_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g19377
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
Aop_g14199 No alias nuclear-encoded organellar RNA polymerase *(NEP) &... 0.03 OrthoFinder output from all 47 species
Ceric.05G056000.1 Ceric.05G056000 nuclear-encoded organellar RNA polymerase *(NEP) &... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021493.49 PDE319, SCA3 RNA biosynthesis.organelle machineries.RNA polymerase... 0.02 OrthoFinder output from all 47 species
Dac_g12046 No alias nuclear-encoded organellar RNA polymerase *(NEP) &... 0.03 OrthoFinder output from all 47 species
GSVIVT01010122001 No alias RNA biosynthesis.organelle machineries.RNA polymerase... 0.03 OrthoFinder output from all 47 species
LOC_Os09g07120.1 LOC_Os09g07120 nuclear-encoded organellar RNA polymerase (NEP) 0.04 OrthoFinder output from all 47 species
Lfl_g35363 No alias nuclear-encoded organellar RNA polymerase *(NEP) &... 0.03 OrthoFinder output from all 47 species
Mp3g02090.1 No alias nuclear-encoded organellar RNA polymerase (NEP) 0.04 OrthoFinder output from all 47 species
Ore_g01633 PDE319, SCA3 nuclear-encoded organellar RNA polymerase *(NEP) &... 0.02 OrthoFinder output from all 47 species
Ore_g19690 MGP3 nuclear-encoded organellar RNA polymerase *(NEP) &... 0.06 OrthoFinder output from all 47 species
Ore_g36475 No alias nuclear-encoded organellar RNA polymerase *(NEP) &... 0.03 OrthoFinder output from all 47 species
Pir_g46882 No alias nuclear-encoded organellar RNA polymerase *(NEP) &... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0035.g011471 No alias nuclear-encoded organellar RNA polymerase *(NEP) &... 0.03 OrthoFinder output from all 47 species
Solyc05g010660.4.1 MGP3, Solyc05g010660 nuclear-encoded organellar RNA polymerase (NEP) 0.03 OrthoFinder output from all 47 species
Zm00001e035572_P001 MGP3, Zm00001e035572 nuclear-encoded organellar RNA polymerase (NEP) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
InterPro domains Description Start Stop
IPR029262 RPOL_N 344 665
No external refs found!