Aev_g20897


Description : associated component *(AFR) of histone deacetylase machineries & original description: none


Gene families : OG0001072 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001072_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g20897

Target Alias Description ECC score Gene Family Method Actions
AT1G19330 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.02 OrthoFinder output from all 47 species
Als_g09801 No alias associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
Aob_g17167 No alias associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
Azfi_s0084.g038914 No alias associated component *(AFR) of histone deacetylase... 0.04 OrthoFinder output from all 47 species
Azfi_s0305.g063893 No alias associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
Azfi_s0873.g090694 No alias associated component *(AFR) of histone deacetylase... 0.02 OrthoFinder output from all 47 species
Cba_g03771 No alias associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
Ceric.18G085500.1 Ceric.18G085500 associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
GSVIVT01009650001 No alias Chromatin organisation.histone modifications.histone... 0.02 OrthoFinder output from all 47 species
GSVIVT01019028001 No alias Chromatin organisation.histone modifications.histone... 0.02 OrthoFinder output from all 47 species
Gb_23696 No alias associated component SAP30 of histone deacetylase machineries 0.04 OrthoFinder output from all 47 species
MA_600107g0010 No alias associated component SAP30 of histone deacetylase machineries 0.02 OrthoFinder output from all 47 species
Pir_g00912 No alias associated component *(AFR) of histone deacetylase... 0.02 OrthoFinder output from all 47 species
Ppi_g18771 No alias associated component *(AFR) of histone deacetylase... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007685 No alias associated component *(AFR) of histone deacetylase... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0147.g023138 No alias associated component *(AFR) of histone deacetylase... 0.02 OrthoFinder output from all 47 species
Sam_g30195 No alias associated component *(AFR) of histone deacetylase... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR025718 SAP30_Sin3-bd 158 211
No external refs found!