Spa_g18112


Description : not classified & original description: none


Gene families : OG0000043 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g18112
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
Adi_g012573 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g014373 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g018230 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g018506 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g021711 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g057084 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g058520 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g059087 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g059695 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g082672 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g106782 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g110200 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g02274 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g07952 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11948 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g16418 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16634 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g21372 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g21523 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g23511 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g25758 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g30236 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g04431 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04749 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05733 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06077 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06380 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06894 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07076 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07137 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07190 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g07393 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07428 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07435 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07473 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07479 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g07485 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07509 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18793 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18812 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19218 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30586 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g32527 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g54929 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g55301 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g55312 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g07597 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g19099 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g19609 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g29116 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g29411 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g31319 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0004.g008664 No alias not classified & original description: CDS=1-3960 0.03 OrthoFinder output from all 47 species
Azfi_s0016.g014220 No alias not classified & original description: CDS=1-2523 0.04 OrthoFinder output from all 47 species
Azfi_s0046.g030122 No alias not classified & original description: CDS=1-1659 0.03 OrthoFinder output from all 47 species
Azfi_s0092.g042984 No alias not classified & original description: CDS=1-3306 0.05 OrthoFinder output from all 47 species
Azfi_s0131.g049164 No alias not classified & original description: CDS=1-2763 0.04 OrthoFinder output from all 47 species
Azfi_s0178.g056215 No alias not classified & original description: CDS=1-2514 0.03 OrthoFinder output from all 47 species
Azfi_s0229.g059123 No alias not classified & original description: CDS=1-2415 0.03 OrthoFinder output from all 47 species
Azfi_s0250.g060258 No alias not classified & original description: CDS=1-1893 0.04 OrthoFinder output from all 47 species
Azfi_s0345.g065805 No alias not classified & original description: CDS=1-2679 0.04 OrthoFinder output from all 47 species
Azfi_s0451.g070770 No alias not classified & original description: CDS=1-2109 0.03 OrthoFinder output from all 47 species
Azfi_s0469.g072874 CRR22 not classified & original description: CDS=1-1206 0.04 OrthoFinder output from all 47 species
Azfi_s1399.g102577 No alias not classified & original description: CDS=1-951 0.04 OrthoFinder output from all 47 species
Cba_g04021 OTP82 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g05328 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05819 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06407 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07309 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07644 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07682 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07704 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g07705 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g07734 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07768 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g20167 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20804 VAC1, ECB2, ATECB2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g20846 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20857 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20867 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29369 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g30017 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g44526 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67241 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g67449 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g74875 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75123 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g75127 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75378 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g75380 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g75387 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.01G085500.1 CRR22, Ceric.01G085500 not classified & original description: pacid=50592662... 0.03 OrthoFinder output from all 47 species
Ceric.03G033500.1 Ceric.03G033500 not classified & original description: pacid=50573115... 0.05 OrthoFinder output from all 47 species
Ceric.10G025600.1 Ceric.10G025600 not classified & original description: pacid=50611862... 0.04 OrthoFinder output from all 47 species
Ceric.10G031100.1 Ceric.10G031100 not classified & original description: pacid=50612341... 0.03 OrthoFinder output from all 47 species
Ceric.14G076500.1 Ceric.14G076500 not classified & original description: pacid=50633826... 0.03 OrthoFinder output from all 47 species
Ceric.15G051000.1 Ceric.15G051000 not classified & original description: pacid=50640878... 0.04 OrthoFinder output from all 47 species
Ceric.18G062200.1 Ceric.18G062200 not classified & original description: pacid=50622099... 0.03 OrthoFinder output from all 47 species
Ceric.20G054700.1 Ceric.20G054700 not classified & original description: pacid=50567573... 0.05 OrthoFinder output from all 47 species
Ceric.21G027500.1 Ceric.21G027500 not classified & original description: pacid=50603039... 0.03 OrthoFinder output from all 47 species
Ceric.21G089400.1 Ceric.21G089400 not classified & original description: pacid=50603367... 0.06 OrthoFinder output from all 47 species
Ceric.26G030400.1 Ceric.26G030400 not classified & original description: pacid=50599909... 0.04 OrthoFinder output from all 47 species
Ceric.36G038100.1 Ceric.36G038100 not classified & original description: pacid=50568680... 0.05 OrthoFinder output from all 47 species
Ceric.37G043200.1 Ceric.37G043200 not classified & original description: pacid=50616612... 0.04 OrthoFinder output from all 47 species
Dac_g10729 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g14985 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g23176 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g27795 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g36893 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g02322 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g02346 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g13612 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g17569 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25062 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g30526 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g37689 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g47619 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g50868 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g51968 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g10732 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g19876 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g23534 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g58364 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g04211 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g18436 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g32918 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g01227 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g01675 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g06113 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g13927 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g14904 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g23960 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g24806 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g25547 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g26164 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g26347 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g26750 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g31946 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g45899 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g48582 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g48641 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g04423 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g14001 OTP84 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g16901 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g17001 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g18405 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g21288 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g25433 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g25475 No alias ssDNA-binding protein *(OSB) & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g36335 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g02291 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g04862 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g06842 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10319 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g15540 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g18621 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g18859 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g19698 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g29461 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g59802 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g63518 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02334 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03867 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g05188 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05885 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06936 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g10292 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g15092 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15493 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g17382 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18662 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g18921 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31291 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g39388 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g41462 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g42032 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g55179 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g55632 No alias cofactor of plastid-encoded RNA polymerase *(TAC9) &... 0.03 OrthoFinder output from all 47 species
Ppi_g63140 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002603 CRR22 not classified & original description: CDS=1-2808 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0016.g006820 No alias not classified & original description: CDS=1-3141 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007300 No alias not classified & original description: CDS=1-4008 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0035.g011395 No alias not classified & original description: CDS=1-2424 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0042.g012786 No alias not classified & original description: CDS=1-3153 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0051.g013947 No alias not classified & original description: CDS=131-3355 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0138.g022524 No alias not classified & original description: CDS=1-1371 0.03 OrthoFinder output from all 47 species
Sam_g16270 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g18164 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g18632 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g24539 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g30430 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g40590 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g48611 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g01164 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g14865 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22163 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g46288 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g08667 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g09995 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g11517 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13474 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g18900 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g21211 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g28274 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 920 944
IPR002885 Pentatricopeptide_repeat 948 975
IPR002885 Pentatricopeptide_repeat 1084 1112
IPR002885 Pentatricopeptide_repeat 1049 1079
IPR002885 Pentatricopeptide_repeat 803 827
IPR002885 Pentatricopeptide_repeat 248 295
IPR002885 Pentatricopeptide_repeat 713 758
IPR002885 Pentatricopeptide_repeat 366 414
IPR002885 Pentatricopeptide_repeat 597 643
IPR002885 Pentatricopeptide_repeat 480 527
IPR002885 Pentatricopeptide_repeat 828 875
IPR002885 Pentatricopeptide_repeat 151 194
No external refs found!