- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : cohesin cofactor *(PDS5) & original description: none
Gene families : OG0000616 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000616_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00065p00174980 | evm_27.TU.AmTr_v1... | Cell cycle.mitosis and meiosis.sister chromatid... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G77600 | No alias | ARM repeat superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT4G31880 | No alias | LOCATED IN: cytosol, chloroplast; EXPRESSED IN: 24 plant... | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g019469 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g022401 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g117140 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aev_g06778 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aev_g18795 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g32765 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g11522 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g20243 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Als_g03900 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g62298 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aob_g07435 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g08128 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g69987 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene50189.t1 | Aspi01Gene50189 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene50191.t1 | Aspi01Gene50191 | cohesin cofactor *(PDS5) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g04527 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Cba_g16434 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g18100 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.11G037000.1 | Ceric.11G037000 | cohesin cofactor *(PDS5) & original description:... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.34G009800.1 | Ceric.34G009800 | cohesin cofactor *(PDS5) & original description:... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.37G021700.1 | Ceric.37G021700 | cohesin cofactor *(PDS5) & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g29223 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g14818 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g36421 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g09843 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dde_g10056 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g02974 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01002824001 | No alias | No description available | 0.07 | OrthoFinder output from all 47 species | |
| GSVIVT01008876001 | No alias | Cell cycle.mitosis and meiosis.sister chromatid... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_02487 | No alias | cohesin cofactor (PDS5) | 0.03 | OrthoFinder output from all 47 species | |
| Gb_09525 | No alias | cohesin cofactor (PDS5) | 0.04 | OrthoFinder output from all 47 species | |
| Gb_23673 | No alias | cohesin cofactor (PDS5) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os02g39920.1 | LOC_Os02g39920 | cohesin cofactor (PDS5) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g17840.1 | LOC_Os06g17840 | cohesin cofactor (PDS5) | 0.05 | OrthoFinder output from all 47 species | |
| Len_g21353 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g21968 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g22380 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g46602 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Lfl_g09667 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| MA_10093130g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| MA_10426926g0010 | No alias | cohesin cofactor (PDS5) | 0.02 | OrthoFinder output from all 47 species | |
| MA_10433886g0010 | No alias | cohesin cofactor (PDS5) | 0.04 | OrthoFinder output from all 47 species | |
| MA_10434055g0010 | No alias | cohesin cofactor (PDS5) | 0.03 | OrthoFinder output from all 47 species | |
| MA_10434304g0010 | No alias | cohesin cofactor (PDS5) | 0.02 | OrthoFinder output from all 47 species | |
| MA_180523g0010 | No alias | cohesin cofactor (PDS5) | 0.03 | OrthoFinder output from all 47 species | |
| MA_214607g0010 | No alias | cohesin cofactor (PDS5) | 0.03 | OrthoFinder output from all 47 species | |
| MA_523g0010 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| MA_815998g0010 | No alias | cohesin cofactor (PDS5) | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g25546 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g18971 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g28747 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ore_g04827 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g18717 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g44286 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g14289 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g57308 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g59813 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0105.g020186 | No alias | exoribonuclease *(SOV) & original description: CDS=109-2307 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g14013 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g18018 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g24524 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Solyc06g065710.3.1 | Solyc06g065710 | cohesin cofactor (PDS5) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc11g012770.2.1 | Solyc11g012770 | cohesin cofactor (PDS5) | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g45754 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g11324 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Tin_g20983 | No alias | cohesin cofactor *(PDS5) & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e015094_P002 | Zm00001e015094 | cohesin cofactor (PDS5) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e019144_P001 | Zm00001e019144 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e022962_P003 | Zm00001e022962 | cohesin cofactor (PDS5) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e030989_P001 | Zm00001e030989 | cohesin cofactor (PDS5) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e036853_P003 | Zm00001e036853 | cohesin cofactor (PDS5) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | HCCA |
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003678 | DNA helicase activity | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| MF | GO:0004402 | histone acetyltransferase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| CC | GO:0005732 | sno(s)RNA-containing ribonucleoprotein complex | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006260 | DNA replication | IEP | HCCA |
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0006364 | rRNA processing | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0006473 | protein acetylation | IEP | HCCA |
| BP | GO:0006475 | internal protein amino acid acetylation | IEP | HCCA |
| BP | GO:0006606 | protein import into nucleus | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0006913 | nucleocytoplasmic transport | IEP | HCCA |
| MF | GO:0008080 | N-acetyltransferase activity | IEP | HCCA |
| MF | GO:0008094 | ATP-dependent activity, acting on DNA | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0008380 | RNA splicing | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
| MF | GO:0016407 | acetyltransferase activity | IEP | HCCA |
| MF | GO:0016410 | N-acyltransferase activity | IEP | HCCA |
| BP | GO:0016570 | histone modification | IEP | HCCA |
| BP | GO:0016573 | histone acetylation | IEP | HCCA |
| BP | GO:0018193 | peptidyl-amino acid modification | IEP | HCCA |
| BP | GO:0018205 | peptidyl-lysine modification | IEP | HCCA |
| BP | GO:0018393 | internal peptidyl-lysine acetylation | IEP | HCCA |
| BP | GO:0018394 | peptidyl-lysine acetylation | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| BP | GO:0033365 | protein localization to organelle | IEP | HCCA |
| MF | GO:0034212 | peptide N-acetyltransferase activity | IEP | HCCA |
| CC | GO:0034457 | Mpp10 complex | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0034504 | protein localization to nucleus | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0043248 | proteasome assembly | IEP | HCCA |
| BP | GO:0043543 | protein acylation | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0051169 | nuclear transport | IEP | HCCA |
| BP | GO:0051170 | import into nucleus | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| MF | GO:0060090 | molecular adaptor activity | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| MF | GO:0061733 | peptide-lysine-N-acetyltransferase activity | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0072594 | establishment of protein localization to organelle | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| MF | GO:0140097 | catalytic activity, acting on DNA | IEP | HCCA |
| MF | GO:0140640 | catalytic activity, acting on a nucleic acid | IEP | HCCA |
| MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
| MF | GO:0140658 | ATP-dependent chromatin remodeler activity | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |