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  5. Spa_g18106

Spa_g18106 (ZFN1)


Aliases : ZFN1

Description : regulatory protein of RNA homeostasis & original description: none


Gene families : OG0000297 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000297_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g18106

Target Alias Description ECC score Gene Family Method Actions
Als_g59230 ZFN1 regulatory protein of RNA homeostasis & original... 0.05 OrthoFinder output from all 47 species
Ehy_g06625 ZFN1 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Gb_02527 ZFN1 C3H zinc finger transcription factor 0.03 OrthoFinder output from all 47 species
Gb_03032 ZFN1 C3H zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Gb_37448 No alias C3H zinc finger transcription factor 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 158 183
IPR000571 Znf_CCCH 315 340
IPR000571 Znf_CCCH 69 93
IPR000571 Znf_CCCH 112 137
IPR000571 Znf_CCCH 363 386
No external refs found!