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  5. Spa_g17454

Spa_g17454 (AtRABH1e, RABH1e)


Aliases : AtRABH1e, RABH1e

Description : H-class RAB GTPase & original description: none


Gene families : OG0001773 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001773_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g17454

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00134180 RAB6A, ATRABH1B,... Vesicle trafficking.regulation of membrane tethering and... 0.04 OrthoFinder output from all 47 species
AT5G10260 AtRABH1e, RABH1e RAB GTPase homolog H1E 0.02 OrthoFinder output from all 47 species
Aspi01Gene64891.t1 AtRABH1e,... H-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G018400.1 AtRABH1e,... H-class RAB GTPase & original description:... 0.03 OrthoFinder output from all 47 species
MA_10426002g0020 AtRABH1e, RABH1e H-class RAB GTPase 0.03 OrthoFinder output from all 47 species
Nbi_g15790 AtRABH1e, RABH1e H-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g36686 No alias H-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006835 dicarboxylic acid transport IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015740 C4-dicarboxylate transport IEP HCCA
BP GO:0015743 malate transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016854 racemase and epimerase activity IEP HCCA
MF GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
InterPro domains Description Start Stop
IPR001806 Small_GTPase 63 221
No external refs found!