Spa_g17299 (SECA1, AtcpSecA, AGY1)

Aliases : SECA1, AtcpSecA, AGY1

Description : component *(SecA1) of thylakoid membrane Sec1 translocation system & original description: none

Gene families : OG0001541 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001541_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Spa_g17299
Cluster	HCCA: Cluster_41

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00045p00116920	SECA1, AtcpSecA,...	Protein translocation.chloroplast.thylakoid membrane...	0.08	OrthoFinder output from all 47 species
AT4G01800	SECA1, AtcpSecA, AGY1	Albino or Glassy Yellow 1	0.05	OrthoFinder output from all 47 species
Adi_g007063	SECA1, AtcpSecA, AGY1	component *(SecA1) of thylakoid membrane Sec1...	0.07	OrthoFinder output from all 47 species
Aev_g01548	SECA1, AtcpSecA, AGY1	component *(SecA1) of thylakoid membrane Sec1...	0.02	OrthoFinder output from all 47 species
Ala_g26842	SECA1, AtcpSecA, AGY1	component *(SecA1) of thylakoid membrane Sec1...	0.04	OrthoFinder output from all 47 species
Als_g14938	SECA1, AtcpSecA, AGY1	component *(SecA1) of thylakoid membrane Sec1...	0.02	OrthoFinder output from all 47 species
Aob_g02321	SECA1, AtcpSecA, AGY1	component *(SecA1) of thylakoid membrane Sec1...	0.05	OrthoFinder output from all 47 species
Aop_g13757	SECA1, AtcpSecA, AGY1	component *(SecA1) of thylakoid membrane Sec1...	0.05	OrthoFinder output from all 47 species
Aop_g60479	SECA1, AtcpSecA, AGY1	component *(SecA1) of thylakoid membrane Sec1...	0.07	OrthoFinder output from all 47 species
Aspi01Gene24353.t1	SECA1, AtcpSecA,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0155.g053632	SECA1, AtcpSecA, AGY1	component *(SecA1) of thylakoid membrane Sec1...	0.04	OrthoFinder output from all 47 species
Cba_g13981	SECA2	component *(SecA2) of inner envelope Sec2 post-import...	0.02	OrthoFinder output from all 47 species
Cba_g17139	SECA1, AtcpSecA, AGY1	component *(SecA1) of thylakoid membrane Sec1...	0.07	OrthoFinder output from all 47 species
Ceric.02G067600.1	SECA1, AtcpSecA,...	component *(SecA1) of thylakoid membrane Sec1...	0.05	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000219.51	SECA1, AtcpSecA, AGY1	Protein translocase subunit SecA, chloroplastic...	0.02	OrthoFinder output from all 47 species
Cre12.g517900	SECA1, AtcpSecA, AGY1	Protein translocation.chloroplast.thylakoid membrane...	0.03	OrthoFinder output from all 47 species
Dac_g06495	SECA1, AtcpSecA, AGY1	component *(SecA1) of thylakoid membrane Sec1...	0.07	OrthoFinder output from all 47 species
Dac_g06496	SECA1, AtcpSecA, AGY1	component *(SecA1) of thylakoid membrane Sec1...	0.04	OrthoFinder output from all 47 species
Dcu_g05773	SECA1, AtcpSecA, AGY1	component *(SecA1) of thylakoid membrane Sec1...	0.04	OrthoFinder output from all 47 species
Dde_g09974	SECA1, AtcpSecA, AGY1	component *(SecA1) of thylakoid membrane Sec1...	0.06	OrthoFinder output from all 47 species
Ehy_g07099	SECA1, AtcpSecA, AGY1	component *(SecA1) of thylakoid membrane Sec1...	0.02	OrthoFinder output from all 47 species
GSVIVT01008813001	SECA2	Protein translocation.chloroplast.inner envelope Sec2...	0.02	OrthoFinder output from all 47 species
GSVIVT01028249001	SECA1, AtcpSecA, AGY1	Protein translocation.chloroplast.thylakoid membrane...	0.05	OrthoFinder output from all 47 species
Gb_34931	SECA1, AtcpSecA, AGY1	component SecA1 of thylakoid membrane Sec1 translocation system	0.06	OrthoFinder output from all 47 species
LOC_Os01g21820.1	SECA1, AtcpSecA,...	component SecA2 of inner envelope Sec2 post-import...	0.05	OrthoFinder output from all 47 species
Len_g36322	SECA1, AtcpSecA, AGY1	component *(SecA1) of thylakoid membrane Sec1...	0.05	OrthoFinder output from all 47 species
Lfl_g02357	SECA1, AtcpSecA, AGY1	component *(SecA1) of thylakoid membrane Sec1...	0.05	OrthoFinder output from all 47 species
MA_304459g0010	SECA1, AtcpSecA, AGY1	Protein translocase subunit SecA, chloroplastic...	0.04	OrthoFinder output from all 47 species
Mp5g09750.1	SECA1, AtcpSecA, AGY1	component SecA1 of thylakoid membrane Sec1 translocation system	0.03	OrthoFinder output from all 47 species
Msp_g23936	SECA1, AtcpSecA, AGY1	component *(SecA1) of thylakoid membrane Sec1...	0.03	OrthoFinder output from all 47 species
Nbi_g12724	SECA2	component *(SecA2) of inner envelope Sec2 post-import...	0.03	OrthoFinder output from all 47 species
Nbi_g15165	SECA1, AtcpSecA, AGY1	component *(SecA1) of thylakoid membrane Sec1...	0.04	OrthoFinder output from all 47 species
Nbi_g30518	SECA1, AtcpSecA, AGY1	component *(SecA1) of thylakoid membrane Sec1...	0.05	OrthoFinder output from all 47 species
Pir_g57370	SECA1, AtcpSecA, AGY1	component *(SecA1) of thylakoid membrane Sec1...	0.05	OrthoFinder output from all 47 species
Pnu_g31499	SECA1, AtcpSecA, AGY1	component *(SecA1) of thylakoid membrane Sec1...	0.02	OrthoFinder output from all 47 species
Ppi_g14444	SECA1, AtcpSecA, AGY1	component *(SecA1) of thylakoid membrane Sec1...	0.04	OrthoFinder output from all 47 species
Sam_g28166	No alias	component *(SecA1) of thylakoid membrane Sec1...	0.05	OrthoFinder output from all 47 species
Smo156007	SECA1, AtcpSecA, AGY1	Protein translocation.chloroplast.thylakoid membrane...	0.03	OrthoFinder output from all 47 species
Solyc01g080840.3.1	SECA1, AtcpSecA,...	component SecA1 of thylakoid membrane Sec1 translocation system	0.04	OrthoFinder output from all 47 species
Tin_g11796	SECA1, AtcpSecA, AGY1	component *(SecA1) of thylakoid membrane Sec1...	0.03	OrthoFinder output from all 47 species
Zm00001e017535_P001	SECA1, AtcpSecA,...	component SecA1 of thylakoid membrane Sec1 translocation system	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0017038	protein import	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004345	glucose-6-phosphate dehydrogenase activity	IEP	HCCA
MF	GO:0005525	GTP binding	IEP	HCCA
BP	GO:0005996	monosaccharide metabolic process	IEP	HCCA
BP	GO:0006006	glucose metabolic process	IEP	HCCA
MF	GO:0016462	pyrophosphatase activity	IEP	HCCA
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	HCCA
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	HCCA
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	HCCA
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	IEP	HCCA
MF	GO:0019001	guanyl nucleotide binding	IEP	HCCA
BP	GO:0019318	hexose metabolic process	IEP	HCCA
MF	GO:0032561	guanyl ribonucleotide binding	IEP	HCCA
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	HCCA
MF	GO:0050661	NADP binding	IEP	HCCA
MF	GO:0071949	FAD binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR011130	SecA_preprotein_X-link_dom	299	405
IPR011116	SecA_Wing/Scaffold	751	962
IPR011115	SecA_DEAD	83	449

External Links

No external refs found!

Spa_g17299 (SECA1, AtcpSecA, AGY1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation