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  5. Spa_g17298

Spa_g17298 (PR 65, PP2AA2, PDF1)


Aliases : PR 65, PP2AA2, PDF1

Description : scaffold component A of PP2A phosphatase complexes & original description: none


Gene families : OG0004583 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004583_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g17298
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
Aop_g11847 PR 65, PP2AA2, PDF1 scaffold component A of PP2A phosphatase complexes &... 0.08 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000217.28 PR 65, PP2AA2, PDF1 Protein modification.dephosphorylation.serine/threonine... 0.03 OrthoFinder output from all 47 species
Dcu_g08848 PR 65, PP2AA2, PDF1 scaffold component A of PP2A phosphatase complexes &... 0.03 OrthoFinder output from all 47 species
Dde_g05873 PR 65, PP2AA2, PDF1 scaffold component A of PP2A phosphatase complexes &... 0.03 OrthoFinder output from all 47 species
Gb_34599 PR 65, PP2AA2, PDF1 scaffolding component PP2A-phosphatase of TON1-TRM-PP2A... 0.02 OrthoFinder output from all 47 species
LOC_Os09g07510.1 PR 65, PP2AA2,... scaffolding component PP2A-phosphatase of TON1-TRM-PP2A... 0.04 OrthoFinder output from all 47 species
Len_g11806 PR 65, PP2AA2, PDF1 scaffold component A of PP2A phosphatase complexes &... 0.05 OrthoFinder output from all 47 species
Msp_g01170 RCN1, REGA,... scaffold component A of PP2A phosphatase complexes &... 0.05 OrthoFinder output from all 47 species
Nbi_g27630 PR 65, PP2AA2, PDF1 scaffold component A of PP2A phosphatase complexes &... 0.04 OrthoFinder output from all 47 species
Pir_g19363 PR 65, PP2AA2, PDF1 scaffold component A of PP2A phosphatase complexes &... 0.05 OrthoFinder output from all 47 species
Smo166330 PR 65, PP2AA2, PDF1 Protein modification.dephosphorylation.serine/threonine... 0.05 OrthoFinder output from all 47 species
Smo232183 PR 65, PP2AA2, PDF1 Protein modification.dephosphorylation.serine/threonine... 0.02 OrthoFinder output from all 47 species
Solyc04g007100.4.1 PR 65, PP2AA2,... scaffolding component PP2A-phosphatase of TON1-TRM-PP2A... 0.02 OrthoFinder output from all 47 species
Tin_g10543 PR 65, PP2AA2, PDF1 scaffold component A of PP2A phosphatase complexes &... 0.05 OrthoFinder output from all 47 species
Zm00001e036610_P002 PR 65, PP2AA2,... scaffolding component PP2A-phosphatase of TON1-TRM-PP2A... 0.03 OrthoFinder output from all 47 species
Zm00001e037405_P003 PR 65, PP2AA2,... scaffolding component PP2A-phosphatase of TON1-TRM-PP2A... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003684 damaged DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
CC GO:0005839 proteasome core complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006289 nucleotide-excision repair IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010498 proteasomal protein catabolic process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016229 steroid dehydrogenase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0018279 protein N-linked glycosylation via asparagine IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
BP GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
InterPro domains Description Start Stop
IPR000357 HEAT 242 270
No external refs found!