Spa_g17277


Description : EC_4.1 carbon-carbon lyase & original description: none


Gene families : OG0000356 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000356_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g17277
Cluster HCCA: Cluster_212

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00266060 SAMDC,... Polyamine... 0.03 OrthoFinder output from all 47 species
AMTR_s00019p00109640 SAMDC,... Polyamine... 0.02 OrthoFinder output from all 47 species
Adi_g056998 No alias EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Als_g35112 SAMDC EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g32298 No alias EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18164 No alias EC_4.1 carbon-carbon lyase & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g36762 SAMDC EC_4.1 carbon-carbon lyase & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g62652 No alias EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.07G058600.1 SAMDC, Ceric.07G058600 EC_4.1 carbon-carbon lyase & original description:... 0.07 OrthoFinder output from all 47 species
Dac_g22759 No alias EC_4.1 carbon-carbon lyase & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g01538 No alias EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Len_g07243 No alias EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g19810 No alias EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
MA_10427924g0010 No alias ornithine decarboxylase 0.03 OrthoFinder output from all 47 species
Msp_g05404 No alias EC_4.1 carbon-carbon lyase & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g05405 No alias EC_4.1 carbon-carbon lyase & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g07578 No alias EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10143 No alias EC_4.1 carbon-carbon lyase & original description: none 0.07 OrthoFinder output from all 47 species
Ppi_g54737 SAMDC EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13557 No alias EC_4.1 carbon-carbon lyase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g080380.4.1 SAMDC4, BUD2,... S-adenosyl methionine decarboxylase 0.03 OrthoFinder output from all 47 species
Solyc04g082030.1.1 Solyc04g082030 ornithine decarboxylase 0.02 OrthoFinder output from all 47 species
Spa_g37126 SAMDC EC_4.1 carbon-carbon lyase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g05489 No alias EC_4.1 carbon-carbon lyase & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g26910 No alias EC_4.1 carbon-carbon lyase & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e034199_P001 SAMDC, Zm00001e034199 S-adenosyl methionine decarboxylase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004014 adenosylmethionine decarboxylase activity IEA Interproscan
BP GO:0006597 spermine biosynthetic process IEA Interproscan
BP GO:0008295 spermidine biosynthetic process IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001985 S-AdoMet_decarboxylase 5 140
No external refs found!