Spa_g16924


Description : not classified & original description: none


Gene families : OG0000394 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000394_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g16924
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
Adi_g042499 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g057408 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g058242 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g088776 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g109802 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g08549 No alias component *(FLX) of FRI-C transcription effector complex... 0.04 OrthoFinder output from all 47 species
Aop_g05107 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06272 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g11013 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.14G017800.1 Ceric.14G017800 not classified & original description: pacid=50634268... 0.04 OrthoFinder output from all 47 species
Ceric.14G017900.1 Ceric.14G017900 not classified & original description: pacid=50633255... 0.03 OrthoFinder output from all 47 species
Ceric.15G054300.1 Ceric.15G054300 not classified & original description: pacid=50639834... 0.03 OrthoFinder output from all 47 species
Ceric.33G055600.1 Ceric.33G055600 not classified & original description: pacid=50607603... 0.04 OrthoFinder output from all 47 species
Dcu_g36620 No alias component *(FLX) of FRI-C transcription effector complex... 0.03 OrthoFinder output from all 47 species
Ehy_g28318 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01011898001 No alias Protein FLX-like 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_37373 No alias Protein FLX-like 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os03g60360.1 LOC_Os03g60360 Protein FLX-like 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Len_g15202 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g23806 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g27255 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10381604g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10429137g0010 No alias Protein FLX-like 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_10429483g0010 No alias Protein FLX-like 2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g00982 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09049 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g29327 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g45083 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g00322 No alias component *(FLX) of FRI-C transcription effector complex... 0.03 OrthoFinder output from all 47 species
Pir_g11645 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g16786 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02944 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g22061 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g065630.4.1 Solyc02g065630 Protein FLX-like 2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc03g121500.3.1 Solyc03g121500 Protein FLX-like 3 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc05g009290.4.1 Solyc05g009290 Protein FLX-like 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g42471 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g02425 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g05949 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26867 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e009183_P001 Zm00001e009183 Protein FLX-like 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e025056_P001 Zm00001e025056 Protein FLX-like 2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!