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  5. Spa_g16711

Spa_g16711 (ECT5)


Aliases : ECT5

Description : methylation reader *(ECT) & original description: none


Gene families : OG0000330 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000330_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g16711

Target Alias Description ECC score Gene Family Method Actions
Adi_g010480 ECT2 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g057161 ECT5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g114839 ECT5 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g02554 ECT8 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g18337 ECT5 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11511 ECT5 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene27732.t1 ECT5, Aspi01Gene27732 methylation reader *(ECT) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0114.g046082 ECT8 methylation reader *(ECT) & original description: CDS=188-1819 0.05 OrthoFinder output from all 47 species
Azfi_s0213.g058278 ECT6 methylation reader *(ECT) & original description: CDS=1-2130 0.07 OrthoFinder output from all 47 species
Cba_g52458 ECT8 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g09075 ECT5 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g14936 ECT5 methylation reader *(ECT) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g55758 ECT5 methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g24888 No alias methylation reader *(ECT) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g03520 ECT5 methylation reader *(ECT) & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR007275 YTH_domain 428 566
No external refs found!