- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : SUF4
Description : FLC-binding component *(SUF4) of FRI-C transcription effector complex & original description: none
Gene families : OG0002334 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002334_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00011p00256770 | SUF4,... | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.07 | OrthoFinder output from all 47 species | |
| Adi_g040851 | SUF4 | FLC-binding component *(SUF4) of FRI-C transcription... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g059003 | SUF4 | FLC-binding component *(SUF4) of FRI-C transcription... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g104400 | SUF4 | FLC-binding component *(SUF4) of FRI-C transcription... | 0.05 | OrthoFinder output from all 47 species | |
| Aev_g09455 | SUF4 | FLC-binding component *(SUF4) of FRI-C transcription... | 0.04 | OrthoFinder output from all 47 species | |
| Als_g19237 | SUF4 | FLC-binding component *(SUF4) of FRI-C transcription... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g54932 | SUF4 | FLC-binding component *(SUF4) of FRI-C transcription... | 0.06 | OrthoFinder output from all 47 species | |
| Als_g58747 | SUF4 | FLC-binding component *(SUF4) of FRI-C transcription... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g22046 | SUF4 | FLC-binding component *(SUF4) of FRI-C transcription... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g25906 | SUF4 | FLC-binding component *(SUF4) of FRI-C transcription... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.18G072400.1 | SUF4, Ceric.18G072400 | FLC-binding component *(SUF4) of FRI-C transcription... | 0.1 | OrthoFinder output from all 47 species | |
| Ceric.31G034100.1 | SUF4, Ceric.31G034100 | FLC-binding component *(SUF4) of FRI-C transcription... | 0.07 | OrthoFinder output from all 47 species | |
| Cre06.g305200 | No alias | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g22754 | SUF4 | FLC-binding component *(SUF4) of FRI-C transcription... | 0.07 | OrthoFinder output from all 47 species | |
| Dcu_g23742 | SUF4 | FLC-binding component *(SUF4) of FRI-C transcription... | 0.06 | OrthoFinder output from all 47 species | |
| Dde_g26782 | SUF4 | FLC-binding component *(SUF4) of FRI-C transcription... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g19813 | SUF4 | FLC-binding component *(SUF4) of FRI-C transcription... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01012145001 | SUF4 | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_38566 | SUF4 | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os09g38790.1 | SUF4, LOC_Os09g38790 | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g12714 | SUF4 | FLC-binding component *(SUF4) of FRI-C transcription... | 0.06 | OrthoFinder output from all 47 species | |
| MA_10435270g0010 | SUF4 | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Mp4g13860.1 | SUF4 | C2H2 zinc finger transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g26521 | SUF4 | FLC-binding component *(SUF4) of FRI-C transcription... | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g03322 | SUF4 | FLC-binding component *(SUF4) of FRI-C transcription... | 0.05 | OrthoFinder output from all 47 species | |
| Pir_g07069 | SUF4 | FLC-binding component *(SUF4) of FRI-C transcription... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g18572 | SUF4 | FLC-binding component *(SUF4) of FRI-C transcription... | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g31144 | SUF4 | FLC-binding component *(SUF4) of FRI-C transcription... | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g12837 | SUF4 | FLC-binding component *(SUF4) of FRI-C transcription... | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g35816 | No alias | FLC-binding component *(SUF4) of FRI-C transcription... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g35817 | No alias | FLC-binding component *(SUF4) of FRI-C transcription... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc02g032120.3.1 | SUF4, Solyc02g032120 | C2H2 zinc finger transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Solyc02g081620.3.1 | SUF4, Solyc02g081620 | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g23103 | SUF4 | FLC-binding component *(SUF4) of FRI-C transcription... | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003729 | mRNA binding | IEP | HCCA |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
| MF | GO:0005488 | binding | IEP | HCCA |
| CC | GO:0005685 | U1 snRNP | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| BP | GO:0006364 | rRNA processing | IEP | HCCA |
| BP | GO:0006376 | mRNA splice site selection | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| BP | GO:0022618 | ribonucleoprotein complex assembly | IEP | HCCA |
| CC | GO:0030532 | small nuclear ribonucleoprotein complex | IEP | HCCA |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
| BP | GO:0071826 | ribonucleoprotein complex subunit organization | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| CC | GO:0097525 | spliceosomal snRNP complex | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
| CC | GO:0120114 | Sm-like protein family complex | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |