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  5. Spa_g15346

Spa_g15346


Description : regulatory protein *(ELMO) involved in pectin-dependent cell adhesion & original description: none


Gene families : OG0000860 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000860_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g15346
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AT4G04360 No alias Protein of unknown function (DUF1068) 0.03 OrthoFinder output from all 47 species
Adi_g011819 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.02 OrthoFinder output from all 47 species
Adi_g116089 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.04 OrthoFinder output from all 47 species
Als_g04212 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Aob_g26014 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Aop_g36657 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Aspi01Gene06004.t1 Aspi01Gene06004 regulatory protein *(ELMO) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Aspi01Gene20225.t1 Aspi01Gene20225 regulatory protein *(ELMO) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Cba_g13119 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.06 OrthoFinder output from all 47 species
Ceric.02G104500.1 Ceric.02G104500 regulatory protein *(ELMO) involved in pectin-dependent... 0.04 OrthoFinder output from all 47 species
Ceric.05G021800.1 Ceric.05G021800 regulatory protein *(ELMO) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Ceric.05G082200.1 Ceric.05G082200 regulatory protein *(ELMO) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Ceric.31G038500.1 Ceric.31G038500 regulatory protein *(ELMO) involved in pectin-dependent... 0.04 OrthoFinder output from all 47 species
Dac_g01353 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.06 OrthoFinder output from all 47 species
Dcu_g39066 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.05 OrthoFinder output from all 47 species
Dcu_g39399 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Dcu_g42903 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Dde_g05721 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
GSVIVT01003726001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os03g56610.1 LOC_Os03g56610 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os04g42340.1 LOC_Os04g42340 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g17259 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.04 OrthoFinder output from all 47 species
Len_g28995 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Lfl_g35834 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Msp_g24920 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Nbi_g04648 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Pir_g06721 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0016.g006979 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0077.g017589 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.02 OrthoFinder output from all 47 species
Sam_g15755 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Sam_g30089 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Spa_g10880 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Spa_g12955 No alias regulatory protein *(ELMO) involved in pectin-dependent... 0.08 OrthoFinder output from all 47 species
Zm00001e041170_P001 Zm00001e041170 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR010471 DUF1068 13 176
No external refs found!