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  5. Spa_g14791

Spa_g14791


Description : symbiosis factor *(VAPYRIN) & original description: none


Gene families : OG0002418 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002418_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g14791
Cluster HCCA: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
Adi_g010714 No alias symbiosis factor *(VAPYRIN) & original description: none 0.1 OrthoFinder output from all 47 species
Als_g01042 No alias symbiosis factor *(VAPYRIN) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g04201 No alias symbiosis factor *(VAPYRIN) & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g07986 No alias symbiosis factor *(VAPYRIN) & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01032765001 ATAKT1, AKT1, KT1 Potassium channel AKT1 OS=Oryza sativa subsp. indica 0.04 OrthoFinder output from all 47 species
Mp6g13170.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g20049 No alias symbiosis factor *(VAPYRIN) & original description: none 0.07 OrthoFinder output from all 47 species
Nbi_g12002 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g10290 No alias symbiosis factor *(VAPYRIN) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002110 Ankyrin_rpt 291 318
IPR002110 Ankyrin_rpt 224 288
IPR002110 Ankyrin_rpt 351 437
IPR002110 Ankyrin_rpt 137 222
IPR000535 MSP_dom 5 104
No external refs found!