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  5. Spa_g13334

Spa_g13334 (RGL1, RGL)


Aliases : RGL1, RGL

Description : GRAS-type transcription factor *(RAD1) & original description: none


Gene families : OG0001108 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001108_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g13334
Cluster HCCA: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00148880 RGA, RGA1,... RNA biosynthesis.transcriptional activation.GRAS... 0.03 OrthoFinder output from all 47 species
AMTR_s00016p00207840 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.GRAS... 0.06 OrthoFinder output from all 47 species
AMTR_s00122p00135250 RGA, RGA1,... RNA biosynthesis.transcriptional activation.GRAS... 0.06 OrthoFinder output from all 47 species
AT1G14920 RGA2, GAI GRAS family transcription factor family protein 0.03 OrthoFinder output from all 47 species
Ala_g27684 RGL1, RGL GRAS-type transcription factor *(RAD1) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene32212.t1 RGL1, RGL,... GRAS-type transcription factor *(RAD1) & original... 0.02 OrthoFinder output from all 47 species
Dac_g09377 RGA2, GAI transcription factor *(DELLA) & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os11g31100.1 RGL1, RGL, LOC_Os11g31100 DELLA-type gibberellin signal transducer. transcription... 0.02 OrthoFinder output from all 47 species
Len_g48752 RGL1, RGL GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g29064 SCR, SGR1 GRAS-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g29234 RGL1, RGL GRAS-type transcription factor *(RAD1) & original... 0.02 OrthoFinder output from all 47 species
Ore_g32516 RGL1, RGL GRAS-type transcription factor *(RAD1) & original... 0.05 OrthoFinder output from all 47 species
Ore_g32765 RGA, RGA1 GRAS-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g33996 RGL1, RGL GRAS-type transcription factor *(RAD1) & original... 0.03 OrthoFinder output from all 47 species
Pir_g37103 RGA, RGA1 transcription factor *(DELLA) & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0075.g017422 RGA2, GAI GRAS-type transcription factor & original description: CDS=1-1875 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR005202 TF_GRAS 255 645
No external refs found!