Aliases : U2AF35B, ATU2AF35B
Description : small subunit of U2AF pre-RNA splicing auxiliary factor complex & original description: none
Gene families : OG0001523 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001523_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Spa_g13108 | |
Cluster | HCCA: Cluster_56 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT5G42820 | U2AF35B, ATU2AF35B | Zinc finger C-x8-C-x5-C-x3-H type family protein | 0.03 | OrthoFinder output from all 47 species | |
Dde_g04258 | U2AF35B, ATU2AF35B | small subunit of U2AF pre-RNA splicing auxiliary factor... | 0.03 | OrthoFinder output from all 47 species | |
Len_g19638 | U2AF35B, ATU2AF35B | small subunit of U2AF pre-RNA splicing auxiliary factor... | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g18692 | U2AF35B, ATU2AF35B | small subunit of U2AF pre-RNA splicing auxiliary factor... | 0.04 | OrthoFinder output from all 47 species | |
Pnu_g17580 | U2AF35B, ATU2AF35B | small subunit of U2AF pre-RNA splicing auxiliary factor... | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g05631 | U2AF35B, ATU2AF35B | small subunit of U2AF pre-RNA splicing auxiliary factor... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000439 | transcription factor TFIIH core complex | IEP | HCCA |
MF | GO:0001671 | ATPase activator activity | IEP | HCCA |
CC | GO:0005667 | transcription regulator complex | IEP | HCCA |
BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
BP | GO:0006281 | DNA repair | IEP | HCCA |
BP | GO:0006289 | nucleotide-excision repair | IEP | HCCA |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
MF | GO:0008168 | methyltransferase activity | IEP | HCCA |
BP | GO:0033554 | cellular response to stress | IEP | HCCA |
BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
CC | GO:0090575 | RNA polymerase II transcription regulator complex | IEP | HCCA |
MF | GO:0098772 | molecular function regulator activity | IEP | HCCA |
CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
MF | GO:0140677 | molecular function activator activity | IEP | HCCA |
No external refs found! |