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  5. Spa_g13095

Spa_g13095


Description : bHLH-type transcription factor & original description: none


Gene families : OG0001169 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001169_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g13095

Target Alias Description ECC score Gene Family Method Actions
AT2G40200 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G41130 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
MA_132680g0010 No alias transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Nbi_g04853 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g51509 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Solyc07g053290.3.1 Solyc07g053290 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP HCCA
CC GO:0030132 clathrin coat of coated pit IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 160 206
No external refs found!