Spa_g12900

Description : EC_4.1 carbon-carbon lyase & original description: none

Gene families : OG0005509 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005509_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Spa_g12900

Target	Alias	Description	ECC score	Gene Family Method
Aob_g17318	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.04	OrthoFinder output from all 47 species
MA_13901g0010	No alias	mevalonate diphosphate decarboxylase	0.05	OrthoFinder output from all 47 species
MA_163941g0010	MVD1, ATMVD1	mevalonate diphosphate decarboxylase	0.06	OrthoFinder output from all 47 species
MA_167897g0010	MVD1, ATMVD1	mevalonate diphosphate decarboxylase	0.06	OrthoFinder output from all 47 species
MA_8662244g0010	MVD1, ATMVD1	mevalonate diphosphate decarboxylase	0.06	OrthoFinder output from all 47 species
MA_8849023g0010	No alias	mevalonate diphosphate decarboxylase	0.06	OrthoFinder output from all 47 species
Mp3g01340.1	No alias	mevalonate diphosphate decarboxylase	0.01	OrthoFinder output from all 47 species
Msp_g09862	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g02874	No alias	EC_4.1 carbon-carbon lyase & original description: none	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003700	DNA-binding transcription factor activity	IEP	HCCA
MF	GO:0004497	monooxygenase activity	IEP	HCCA
MF	GO:0005506	iron ion binding	IEP	HCCA
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	HCCA
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	HCCA
MF	GO:0020037	heme binding	IEP	HCCA
MF	GO:0046906	tetrapyrrole binding	IEP	HCCA
MF	GO:0140110	transcription regulator activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006204	GHMP_kinase_N_dom	117	176
IPR041431	Mvd1_C	207	400

External Links

No external refs found!