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  5. Spa_g12674

Spa_g12674


Description : not classified & original description: none


Gene families : OG0000898 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000898_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g12674
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
Adi_g004896 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g014978 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g020466 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g059258 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g08351 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04542 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g19277 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12701 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g38161 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.23G038800.1 Ceric.23G038800 not classified & original description: pacid=50609666... 0.03 OrthoFinder output from all 47 species
Dac_g11372 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dac_g28141 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g04781 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g13939 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g40965 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02714 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04837 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g09930 FRL2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g21938 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_09729 No alias FRIGIDA-like protein 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Gb_33604 No alias FRIGIDA-like protein 3 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_40916 No alias FRIGIDA-like protein 4a OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Lfl_g09476 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g35443 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10430352g0010 No alias FRIGIDA-like protein 4b OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_10436820g0010 No alias FRIGIDA-like protein 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_105292g0010 No alias FRIGIDA-like protein 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp1g06900.1 No alias FRIGIDA-like protein 3 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Nbi_g01067 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Ore_g04962 FRL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19044 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30965 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g12034 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g13765 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19358 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g25061 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g30088 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g24033 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g06038 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g15398 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e010685_P001 Zm00001e010685 FRIGIDA-like protein 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e035443_P001 Zm00001e035443 FRIGIDA-like protein 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
CC GO:0070939 Dsl1/NZR complex IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR012474 Frigida 203 498
No external refs found!